Protein–RNA interactions for Protein: Q9JJK5

Herpud1, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud1Q9JJK5 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Herpud1Q9JJK5 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Herpud1Q9JJK5 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Herpud1Q9JJK5 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Herpud1Q9JJK5 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Herpud1Q9JJK5 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
Herpud1Q9JJK5 Gm22325-201ENSMUST00000158904 308 ntBASIC14.88□□□□□ -0.03
Herpud1Q9JJK5 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC14.88□□□□□ -0.03
Herpud1Q9JJK5 Gm7514-201ENSMUST00000209475 934 ntBASIC14.88□□□□□ -0.03
Herpud1Q9JJK5 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Herpud1Q9JJK5 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC14.88□□□□□ -0.03
Herpud1Q9JJK5 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Herpud1Q9JJK5 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Herpud1Q9JJK5 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Herpud1Q9JJK5 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Herpud1Q9JJK5 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.88□□□□□ -0.03
Herpud1Q9JJK5 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Herpud1Q9JJK5 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Herpud1Q9JJK5 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Herpud1Q9JJK5 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Herpud1Q9JJK5 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Herpud1Q9JJK5 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Herpud1Q9JJK5 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.87□□□□□ -0.03
Herpud1Q9JJK5 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Herpud1Q9JJK5 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Herpud1Q9JJK5 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Herpud1Q9JJK5 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Herpud1Q9JJK5 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Herpud1Q9JJK5 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Herpud1Q9JJK5 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Herpud1Q9JJK5 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Herpud1Q9JJK5 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Herpud1Q9JJK5 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Herpud1Q9JJK5 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Herpud1Q9JJK5 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Herpud1Q9JJK5 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.87□□□□□ -0.03
Herpud1Q9JJK5 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Herpud1Q9JJK5 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.87□□□□□ -0.03
Herpud1Q9JJK5 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Herpud1Q9JJK5 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Herpud1Q9JJK5 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Herpud1Q9JJK5 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Herpud1Q9JJK5 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Herpud1Q9JJK5 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Herpud1Q9JJK5 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Herpud1Q9JJK5 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC14.86□□□□□ -0.03
Herpud1Q9JJK5 Gm18671-201ENSMUST00000214826 683 ntBASIC14.86□□□□□ -0.03
Herpud1Q9JJK5 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Herpud1Q9JJK5 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Herpud1Q9JJK5 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Herpud1Q9JJK5 Gm38345-201ENSMUST00000192635 1748 ntBASIC14.86□□□□□ -0.03
Herpud1Q9JJK5 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Herpud1Q9JJK5 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Herpud1Q9JJK5 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Herpud1Q9JJK5 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Herpud1Q9JJK5 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Herpud1Q9JJK5 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Herpud1Q9JJK5 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Herpud1Q9JJK5 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Herpud1Q9JJK5 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Herpud1Q9JJK5 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC14.85□□□□□ -0.03
Herpud1Q9JJK5 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Herpud1Q9JJK5 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Herpud1Q9JJK5 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Herpud1Q9JJK5 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Herpud1Q9JJK5 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC14.85□□□□□ -0.03
Herpud1Q9JJK5 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Herpud1Q9JJK5 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Herpud1Q9JJK5 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Herpud1Q9JJK5 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Herpud1Q9JJK5 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Herpud1Q9JJK5 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Herpud1Q9JJK5 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Herpud1Q9JJK5 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Herpud1Q9JJK5 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Herpud1Q9JJK5 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Herpud1Q9JJK5 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.85□□□□□ -0.03
Herpud1Q9JJK5 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Herpud1Q9JJK5 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Herpud1Q9JJK5 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.84□□□□□ -0.03
Herpud1Q9JJK5 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Herpud1Q9JJK5 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Herpud1Q9JJK5 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Herpud1Q9JJK5 Gm42642-201ENSMUST00000200683 355 ntBASIC14.84□□□□□ -0.03
Herpud1Q9JJK5 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC14.84□□□□□ -0.03
Herpud1Q9JJK5 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC14.84□□□□□ -0.03
Herpud1Q9JJK5 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC14.84□□□□□ -0.03
Herpud1Q9JJK5 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Herpud1Q9JJK5 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC14.84□□□□□ -0.03
Herpud1Q9JJK5 Gm5874-201ENSMUST00000096101 508 ntBASIC14.84□□□□□ -0.03
Herpud1Q9JJK5 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Herpud1Q9JJK5 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Herpud1Q9JJK5 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Herpud1Q9JJK5 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Herpud1Q9JJK5 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Herpud1Q9JJK5 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Herpud1Q9JJK5 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Herpud1Q9JJK5 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Herpud1Q9JJK5 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Herpud1Q9JJK5 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms