Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim39Q9ESN2 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim39Q9ESN2 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim39Q9ESN2 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim39Q9ESN2 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim39Q9ESN2 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim39Q9ESN2 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim39Q9ESN2 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.68■□□□□ 0.26
Trim39Q9ESN2 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.68■□□□□ 0.26
Trim39Q9ESN2 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim39Q9ESN2 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trim39Q9ESN2 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim39Q9ESN2 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim39Q9ESN2 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.68■□□□□ 0.26
Trim39Q9ESN2 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim39Q9ESN2 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim39Q9ESN2 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Trim39Q9ESN2 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim39Q9ESN2 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.67■□□□□ 0.26
Trim39Q9ESN2 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
Trim39Q9ESN2 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Trim39Q9ESN2 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim39Q9ESN2 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim39Q9ESN2 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim39Q9ESN2 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim39Q9ESN2 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim39Q9ESN2 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim39Q9ESN2 Gm26571-201ENSMUST00000181399 666 ntBASIC16.67■□□□□ 0.26
Trim39Q9ESN2 Gm42569-201ENSMUST00000200539 472 ntBASIC16.67■□□□□ 0.26
Trim39Q9ESN2 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
Trim39Q9ESN2 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim39Q9ESN2 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.67■□□□□ 0.26
Trim39Q9ESN2 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim39Q9ESN2 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim39Q9ESN2 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim39Q9ESN2 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim39Q9ESN2 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.66■□□□□ 0.26
Trim39Q9ESN2 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Trim39Q9ESN2 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim39Q9ESN2 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim39Q9ESN2 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.66■□□□□ 0.26
Trim39Q9ESN2 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.66■□□□□ 0.26
Trim39Q9ESN2 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.66■□□□□ 0.26
Trim39Q9ESN2 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim39Q9ESN2 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim39Q9ESN2 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim39Q9ESN2 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Trim39Q9ESN2 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trim39Q9ESN2 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim39Q9ESN2 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim39Q9ESN2 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim39Q9ESN2 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trim39Q9ESN2 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.66■□□□□ 0.26
Trim39Q9ESN2 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim39Q9ESN2 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim39Q9ESN2 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim39Q9ESN2 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.65■□□□□ 0.26
Trim39Q9ESN2 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim39Q9ESN2 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim39Q9ESN2 Nespas-201ENSMUST00000143738 1083 ntBASIC16.65■□□□□ 0.26
Trim39Q9ESN2 Gm6420-201ENSMUST00000193885 723 ntBASIC16.65■□□□□ 0.26
Trim39Q9ESN2 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim39Q9ESN2 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trim39Q9ESN2 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim39Q9ESN2 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trim39Q9ESN2 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Trim39Q9ESN2 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim39Q9ESN2 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trim39Q9ESN2 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim39Q9ESN2 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim39Q9ESN2 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim39Q9ESN2 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim39Q9ESN2 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim39Q9ESN2 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.65■□□□□ 0.26
Trim39Q9ESN2 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim39Q9ESN2 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim39Q9ESN2 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Trim39Q9ESN2 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim39Q9ESN2 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim39Q9ESN2 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim39Q9ESN2 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim39Q9ESN2 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim39Q9ESN2 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim39Q9ESN2 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim39Q9ESN2 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim39Q9ESN2 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim39Q9ESN2 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim39Q9ESN2 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim39Q9ESN2 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim39Q9ESN2 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Trim39Q9ESN2 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim39Q9ESN2 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim39Q9ESN2 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim39Q9ESN2 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim39Q9ESN2 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim39Q9ESN2 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim39Q9ESN2 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.63■□□□□ 0.25
Trim39Q9ESN2 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trim39Q9ESN2 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim39Q9ESN2 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms