Protein–RNA interactions for Protein: Q9ERH7

Hipk3, Homeodomain-interacting protein kinase 3, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hipk3Q9ERH7 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hipk3Q9ERH7 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hipk3Q9ERH7 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Hipk3Q9ERH7 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hipk3Q9ERH7 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hipk3Q9ERH7 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.14■□□□□ 0.33
Hipk3Q9ERH7 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.14■□□□□ 0.33
Hipk3Q9ERH7 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hipk3Q9ERH7 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hipk3Q9ERH7 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hipk3Q9ERH7 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Hipk3Q9ERH7 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hipk3Q9ERH7 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.14■□□□□ 0.33
Hipk3Q9ERH7 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hipk3Q9ERH7 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Hipk3Q9ERH7 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Hipk3Q9ERH7 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hipk3Q9ERH7 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hipk3Q9ERH7 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hipk3Q9ERH7 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hipk3Q9ERH7 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hipk3Q9ERH7 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hipk3Q9ERH7 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hipk3Q9ERH7 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hipk3Q9ERH7 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hipk3Q9ERH7 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hipk3Q9ERH7 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hipk3Q9ERH7 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.13■□□□□ 0.33
Hipk3Q9ERH7 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Hipk3Q9ERH7 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.13■□□□□ 0.33
Hipk3Q9ERH7 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hipk3Q9ERH7 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hipk3Q9ERH7 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hipk3Q9ERH7 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Hipk3Q9ERH7 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.13■□□□□ 0.33
Hipk3Q9ERH7 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hipk3Q9ERH7 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hipk3Q9ERH7 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hipk3Q9ERH7 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hipk3Q9ERH7 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hipk3Q9ERH7 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hipk3Q9ERH7 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.12■□□□□ 0.33
Hipk3Q9ERH7 Gm7291-201ENSMUST00000199147 382 ntBASIC17.12■□□□□ 0.33
Hipk3Q9ERH7 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hipk3Q9ERH7 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hipk3Q9ERH7 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hipk3Q9ERH7 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hipk3Q9ERH7 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hipk3Q9ERH7 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hipk3Q9ERH7 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hipk3Q9ERH7 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hipk3Q9ERH7 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hipk3Q9ERH7 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hipk3Q9ERH7 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hipk3Q9ERH7 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.12■□□□□ 0.33
Hipk3Q9ERH7 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.12■□□□□ 0.33
Hipk3Q9ERH7 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hipk3Q9ERH7 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hipk3Q9ERH7 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hipk3Q9ERH7 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hipk3Q9ERH7 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Hipk3Q9ERH7 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Hipk3Q9ERH7 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hipk3Q9ERH7 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hipk3Q9ERH7 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hipk3Q9ERH7 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hipk3Q9ERH7 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Hipk3Q9ERH7 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hipk3Q9ERH7 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hipk3Q9ERH7 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.11■□□□□ 0.33
Hipk3Q9ERH7 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hipk3Q9ERH7 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hipk3Q9ERH7 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Hipk3Q9ERH7 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.11■□□□□ 0.33
Hipk3Q9ERH7 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hipk3Q9ERH7 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hipk3Q9ERH7 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.1■□□□□ 0.33
Hipk3Q9ERH7 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hipk3Q9ERH7 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.1■□□□□ 0.33
Hipk3Q9ERH7 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Hipk3Q9ERH7 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hipk3Q9ERH7 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hipk3Q9ERH7 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Hipk3Q9ERH7 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hipk3Q9ERH7 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hipk3Q9ERH7 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hipk3Q9ERH7 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hipk3Q9ERH7 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hipk3Q9ERH7 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hipk3Q9ERH7 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hipk3Q9ERH7 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hipk3Q9ERH7 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hipk3Q9ERH7 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hipk3Q9ERH7 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Hipk3Q9ERH7 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Hipk3Q9ERH7 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.09■□□□□ 0.33
Hipk3Q9ERH7 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hipk3Q9ERH7 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hipk3Q9ERH7 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Hipk3Q9ERH7 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms