Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Upf1Q9EPU0 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Upf1Q9EPU0 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.45■□□□□ 0.86
Upf1Q9EPU0 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Upf1Q9EPU0 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC20.45■□□□□ 0.86
Upf1Q9EPU0 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Upf1Q9EPU0 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Upf1Q9EPU0 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Upf1Q9EPU0 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Upf1Q9EPU0 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Upf1Q9EPU0 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC20.44■□□□□ 0.86
Upf1Q9EPU0 Gm8097-201ENSMUST00000117903 829 ntBASIC20.44■□□□□ 0.86
Upf1Q9EPU0 Gm15372-201ENSMUST00000120729 834 ntBASIC20.44■□□□□ 0.86
Upf1Q9EPU0 Gm12350-201ENSMUST00000121208 462 ntBASIC20.44■□□□□ 0.86
Upf1Q9EPU0 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
Upf1Q9EPU0 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC20.44■□□□□ 0.86
Upf1Q9EPU0 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Upf1Q9EPU0 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.44■□□□□ 0.86
Upf1Q9EPU0 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Upf1Q9EPU0 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Upf1Q9EPU0 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Upf1Q9EPU0 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Upf1Q9EPU0 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Upf1Q9EPU0 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Upf1Q9EPU0 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Upf1Q9EPU0 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Upf1Q9EPU0 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Upf1Q9EPU0 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC20.43■□□□□ 0.86
Upf1Q9EPU0 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC20.43■□□□□ 0.86
Upf1Q9EPU0 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC20.43■□□□□ 0.86
Upf1Q9EPU0 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Upf1Q9EPU0 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Upf1Q9EPU0 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Upf1Q9EPU0 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Upf1Q9EPU0 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Upf1Q9EPU0 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Upf1Q9EPU0 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Upf1Q9EPU0 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Upf1Q9EPU0 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Upf1Q9EPU0 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Upf1Q9EPU0 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Upf1Q9EPU0 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Upf1Q9EPU0 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC20.42■□□□□ 0.86
Upf1Q9EPU0 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Upf1Q9EPU0 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Upf1Q9EPU0 Gm9731-201ENSMUST00000209480 747 ntBASIC20.42■□□□□ 0.86
Upf1Q9EPU0 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Upf1Q9EPU0 Bloc1s5-203ENSMUST00000224902 612 ntBASIC20.42■□□□□ 0.86
Upf1Q9EPU0 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Upf1Q9EPU0 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Upf1Q9EPU0 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Upf1Q9EPU0 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Upf1Q9EPU0 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Upf1Q9EPU0 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Upf1Q9EPU0 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Upf1Q9EPU0 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Upf1Q9EPU0 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Upf1Q9EPU0 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Upf1Q9EPU0 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Upf1Q9EPU0 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC20.42■□□□□ 0.86
Upf1Q9EPU0 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Upf1Q9EPU0 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Upf1Q9EPU0 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Upf1Q9EPU0 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC20.41■□□□□ 0.86
Upf1Q9EPU0 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC20.41■□□□□ 0.86
Upf1Q9EPU0 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Upf1Q9EPU0 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC20.41■□□□□ 0.86
Upf1Q9EPU0 Gm6376-201ENSMUST00000209407 580 ntBASIC20.41■□□□□ 0.86
Upf1Q9EPU0 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.41■□□□□ 0.86
Upf1Q9EPU0 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Upf1Q9EPU0 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC20.41■□□□□ 0.86
Upf1Q9EPU0 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Upf1Q9EPU0 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Upf1Q9EPU0 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Upf1Q9EPU0 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.41■□□□□ 0.86
Upf1Q9EPU0 Actl10-202ENSMUST00000226583 1501 ntBASIC20.41■□□□□ 0.86
Upf1Q9EPU0 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Upf1Q9EPU0 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Upf1Q9EPU0 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Upf1Q9EPU0 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Upf1Q9EPU0 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Upf1Q9EPU0 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Upf1Q9EPU0 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Upf1Q9EPU0 Gm24513-201ENSMUST00000174964 138 ntBASIC20.4■□□□□ 0.86
Upf1Q9EPU0 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Upf1Q9EPU0 Cxcl14-202ENSMUST00000224801 1467 ntBASIC20.4■□□□□ 0.86
Upf1Q9EPU0 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Upf1Q9EPU0 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Upf1Q9EPU0 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Upf1Q9EPU0 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Upf1Q9EPU0 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Upf1Q9EPU0 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Upf1Q9EPU0 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC20.39■□□□□ 0.85
Upf1Q9EPU0 Gm27397-201ENSMUST00000184997 107 ntBASIC20.39■□□□□ 0.85
Upf1Q9EPU0 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Upf1Q9EPU0 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC20.39■□□□□ 0.85
Upf1Q9EPU0 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.39■□□□□ 0.85
Upf1Q9EPU0 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Upf1Q9EPU0 Gm7935-201ENSMUST00000100555 1278 ntBASIC20.38■□□□□ 0.85
Upf1Q9EPU0 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms