Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cpne8Q9DC53 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cpne8Q9DC53 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cpne8Q9DC53 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cpne8Q9DC53 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpne8Q9DC53 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpne8Q9DC53 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpne8Q9DC53 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpne8Q9DC53 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpne8Q9DC53 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Cpne8Q9DC53 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpne8Q9DC53 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpne8Q9DC53 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpne8Q9DC53 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.64■□□□□ 0.57
Cpne8Q9DC53 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpne8Q9DC53 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpne8Q9DC53 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.64■□□□□ 0.57
Cpne8Q9DC53 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpne8Q9DC53 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpne8Q9DC53 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpne8Q9DC53 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.64■□□□□ 0.57
Cpne8Q9DC53 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpne8Q9DC53 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpne8Q9DC53 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpne8Q9DC53 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpne8Q9DC53 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.63■□□□□ 0.57
Cpne8Q9DC53 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpne8Q9DC53 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Cpne8Q9DC53 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Cpne8Q9DC53 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Cpne8Q9DC53 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Cpne8Q9DC53 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpne8Q9DC53 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.63■□□□□ 0.57
Cpne8Q9DC53 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.63■□□□□ 0.57
Cpne8Q9DC53 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpne8Q9DC53 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cpne8Q9DC53 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpne8Q9DC53 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpne8Q9DC53 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Cpne8Q9DC53 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Cpne8Q9DC53 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpne8Q9DC53 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpne8Q9DC53 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpne8Q9DC53 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cpne8Q9DC53 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cpne8Q9DC53 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cpne8Q9DC53 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.62■□□□□ 0.57
Cpne8Q9DC53 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cpne8Q9DC53 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.62■□□□□ 0.57
Cpne8Q9DC53 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Cpne8Q9DC53 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cpne8Q9DC53 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Cpne8Q9DC53 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cpne8Q9DC53 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cpne8Q9DC53 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.62■□□□□ 0.57
Cpne8Q9DC53 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cpne8Q9DC53 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cpne8Q9DC53 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.62■□□□□ 0.57
Cpne8Q9DC53 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cpne8Q9DC53 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cpne8Q9DC53 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cpne8Q9DC53 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cpne8Q9DC53 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Cpne8Q9DC53 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cpne8Q9DC53 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cpne8Q9DC53 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cpne8Q9DC53 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Cpne8Q9DC53 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cpne8Q9DC53 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cpne8Q9DC53 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cpne8Q9DC53 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cpne8Q9DC53 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cpne8Q9DC53 Gm2399-201ENSMUST00000104944 225 ntBASIC18.61■□□□□ 0.57
Cpne8Q9DC53 Mir5133-201ENSMUST00000174955 77 ntBASIC18.61■□□□□ 0.57
Cpne8Q9DC53 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.61■□□□□ 0.57
Cpne8Q9DC53 Gm44549-201ENSMUST00000208351 577 ntBASIC18.61■□□□□ 0.57
Cpne8Q9DC53 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.61■□□□□ 0.57
Cpne8Q9DC53 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cpne8Q9DC53 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cpne8Q9DC53 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cpne8Q9DC53 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.61■□□□□ 0.57
Cpne8Q9DC53 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.61■□□□□ 0.57
Cpne8Q9DC53 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cpne8Q9DC53 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpne8Q9DC53 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Cpne8Q9DC53 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpne8Q9DC53 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.6■□□□□ 0.57
Cpne8Q9DC53 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpne8Q9DC53 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpne8Q9DC53 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpne8Q9DC53 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.6■□□□□ 0.57
Cpne8Q9DC53 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpne8Q9DC53 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.6■□□□□ 0.57
Cpne8Q9DC53 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpne8Q9DC53 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.6■□□□□ 0.57
Cpne8Q9DC53 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpne8Q9DC53 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpne8Q9DC53 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpne8Q9DC53 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpne8Q9DC53 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms