Protein–RNA interactions for Protein: Q9DBU5

Rnf6, E3 ubiquitin-protein ligase RNF6, mousemouse

Predictions only

Length 667 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf6Q9DBU5 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Rnf6Q9DBU5 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.21■□□□□ 0.67
Rnf6Q9DBU5 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf6Q9DBU5 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.2■□□□□ 0.66
Rnf6Q9DBU5 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf6Q9DBU5 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf6Q9DBU5 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf6Q9DBU5 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf6Q9DBU5 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf6Q9DBU5 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf6Q9DBU5 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf6Q9DBU5 Gm12441-201ENSMUST00000121806 588 ntBASIC19.2■□□□□ 0.66
Rnf6Q9DBU5 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf6Q9DBU5 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf6Q9DBU5 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf6Q9DBU5 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf6Q9DBU5 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf6Q9DBU5 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
Rnf6Q9DBU5 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf6Q9DBU5 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf6Q9DBU5 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf6Q9DBU5 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf6Q9DBU5 Gm12896-201ENSMUST00000118430 226 ntBASIC19.19■□□□□ 0.66
Rnf6Q9DBU5 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Rnf6Q9DBU5 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.19■□□□□ 0.66
Rnf6Q9DBU5 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.19■□□□□ 0.66
Rnf6Q9DBU5 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf6Q9DBU5 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf6Q9DBU5 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf6Q9DBU5 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Rnf6Q9DBU5 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf6Q9DBU5 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf6Q9DBU5 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Rnf6Q9DBU5 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf6Q9DBU5 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.18■□□□□ 0.66
Rnf6Q9DBU5 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Rnf6Q9DBU5 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.18■□□□□ 0.66
Rnf6Q9DBU5 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf6Q9DBU5 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf6Q9DBU5 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf6Q9DBU5 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf6Q9DBU5 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Rnf6Q9DBU5 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.17■□□□□ 0.66
Rnf6Q9DBU5 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf6Q9DBU5 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
Rnf6Q9DBU5 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf6Q9DBU5 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.17■□□□□ 0.66
Rnf6Q9DBU5 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf6Q9DBU5 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf6Q9DBU5 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf6Q9DBU5 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf6Q9DBU5 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf6Q9DBU5 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf6Q9DBU5 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Rnf6Q9DBU5 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Rnf6Q9DBU5 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf6Q9DBU5 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf6Q9DBU5 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf6Q9DBU5 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.16■□□□□ 0.66
Rnf6Q9DBU5 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf6Q9DBU5 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.16■□□□□ 0.66
Rnf6Q9DBU5 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf6Q9DBU5 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf6Q9DBU5 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf6Q9DBU5 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf6Q9DBU5 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf6Q9DBU5 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf6Q9DBU5 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Rnf6Q9DBU5 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf6Q9DBU5 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf6Q9DBU5 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Rnf6Q9DBU5 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf6Q9DBU5 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.16■□□□□ 0.66
Rnf6Q9DBU5 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf6Q9DBU5 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Rnf6Q9DBU5 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.16■□□□□ 0.66
Rnf6Q9DBU5 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf6Q9DBU5 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Rnf6Q9DBU5 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf6Q9DBU5 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf6Q9DBU5 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf6Q9DBU5 Gm20049-201ENSMUST00000219950 730 ntBASIC19.15■□□□□ 0.66
Rnf6Q9DBU5 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf6Q9DBU5 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.15■□□□□ 0.66
Rnf6Q9DBU5 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf6Q9DBU5 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf6Q9DBU5 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf6Q9DBU5 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.15■□□□□ 0.66
Rnf6Q9DBU5 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf6Q9DBU5 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Rnf6Q9DBU5 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf6Q9DBU5 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rnf6Q9DBU5 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rnf6Q9DBU5 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rnf6Q9DBU5 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rnf6Q9DBU5 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rnf6Q9DBU5 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Rnf6Q9DBU5 Idnk-204ENSMUST00000226010 1898 ntBASIC19.14■□□□□ 0.65
Rnf6Q9DBU5 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf6Q9DBU5 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms