Protein–RNA interactions for Protein: Q9D3S3

Snx29, Sorting nexin-29, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx29Q9D3S3 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.67■□□□□ 0.74
Snx29Q9D3S3 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Snx29Q9D3S3 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC19.67■□□□□ 0.74
Snx29Q9D3S3 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Snx29Q9D3S3 Gm24841-201ENSMUST00000158676 357 ntBASIC19.67■□□□□ 0.74
Snx29Q9D3S3 Gm18101-201ENSMUST00000215769 548 ntBASIC19.67■□□□□ 0.74
Snx29Q9D3S3 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Snx29Q9D3S3 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Snx29Q9D3S3 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Snx29Q9D3S3 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC19.67■□□□□ 0.74
Snx29Q9D3S3 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Snx29Q9D3S3 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.67■□□□□ 0.74
Snx29Q9D3S3 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Snx29Q9D3S3 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Snx29Q9D3S3 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Snx29Q9D3S3 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Snx29Q9D3S3 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Snx29Q9D3S3 Gm16061-201ENSMUST00000122167 857 ntBASIC19.66■□□□□ 0.74
Snx29Q9D3S3 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Snx29Q9D3S3 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC19.66■□□□□ 0.74
Snx29Q9D3S3 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Snx29Q9D3S3 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Snx29Q9D3S3 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Snx29Q9D3S3 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Snx29Q9D3S3 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Snx29Q9D3S3 Gm13401-201ENSMUST00000117074 291 ntBASIC19.65■□□□□ 0.74
Snx29Q9D3S3 Gm7638-201ENSMUST00000121348 967 ntBASIC19.65■□□□□ 0.74
Snx29Q9D3S3 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Snx29Q9D3S3 Gm22697-201ENSMUST00000175194 63 ntBASIC19.65■□□□□ 0.74
Snx29Q9D3S3 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Snx29Q9D3S3 Gm10459-201ENSMUST00000202708 1155 ntBASIC19.65■□□□□ 0.74
Snx29Q9D3S3 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Snx29Q9D3S3 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Snx29Q9D3S3 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.65■□□□□ 0.74
Snx29Q9D3S3 Gm10819-201ENSMUST00000099988 561 ntBASIC19.65■□□□□ 0.74
Snx29Q9D3S3 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Snx29Q9D3S3 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
Snx29Q9D3S3 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Snx29Q9D3S3 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Snx29Q9D3S3 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Snx29Q9D3S3 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Snx29Q9D3S3 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Snx29Q9D3S3 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Snx29Q9D3S3 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Snx29Q9D3S3 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Snx29Q9D3S3 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Snx29Q9D3S3 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Snx29Q9D3S3 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Snx29Q9D3S3 Gm6345-202ENSMUST00000180900 204 ntBASIC19.64■□□□□ 0.73
Snx29Q9D3S3 Gm29791-202ENSMUST00000207888 369 ntBASIC19.64■□□□□ 0.73
Snx29Q9D3S3 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Snx29Q9D3S3 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
Snx29Q9D3S3 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Snx29Q9D3S3 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Snx29Q9D3S3 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Snx29Q9D3S3 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Snx29Q9D3S3 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Snx29Q9D3S3 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.63■□□□□ 0.73
Snx29Q9D3S3 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.63■□□□□ 0.73
Snx29Q9D3S3 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Snx29Q9D3S3 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.63■□□□□ 0.73
Snx29Q9D3S3 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Snx29Q9D3S3 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Snx29Q9D3S3 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Snx29Q9D3S3 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Snx29Q9D3S3 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC19.63■□□□□ 0.73
Snx29Q9D3S3 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Snx29Q9D3S3 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Snx29Q9D3S3 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Snx29Q9D3S3 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Snx29Q9D3S3 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Snx29Q9D3S3 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Snx29Q9D3S3 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Snx29Q9D3S3 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Snx29Q9D3S3 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Snx29Q9D3S3 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Snx29Q9D3S3 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Snx29Q9D3S3 Gm13474-201ENSMUST00000122466 815 ntBASIC19.62■□□□□ 0.73
Snx29Q9D3S3 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Snx29Q9D3S3 Gm4217-201ENSMUST00000182243 1002 ntBASIC19.62■□□□□ 0.73
Snx29Q9D3S3 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Snx29Q9D3S3 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Snx29Q9D3S3 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Snx29Q9D3S3 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Snx29Q9D3S3 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Snx29Q9D3S3 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Snx29Q9D3S3 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Snx29Q9D3S3 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Snx29Q9D3S3 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.61■□□□□ 0.73
Snx29Q9D3S3 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Snx29Q9D3S3 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.61■□□□□ 0.73
Snx29Q9D3S3 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Snx29Q9D3S3 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Snx29Q9D3S3 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Snx29Q9D3S3 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.61■□□□□ 0.73
Snx29Q9D3S3 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Snx29Q9D3S3 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC19.61■□□□□ 0.73
Snx29Q9D3S3 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.61■□□□□ 0.73
Snx29Q9D3S3 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Snx29Q9D3S3 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms