Protein–RNA interactions for Protein: Q9D3I0

5530400C23Rik, RIKEN cDNA 5530400C23 gene, mousemouse

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5530400C23RikQ9D3I0 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
5530400C23RikQ9D3I0 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.57■□□□□ 0.4
5530400C23RikQ9D3I0 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
5530400C23RikQ9D3I0 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
5530400C23RikQ9D3I0 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
5530400C23RikQ9D3I0 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
5530400C23RikQ9D3I0 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
5530400C23RikQ9D3I0 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
5530400C23RikQ9D3I0 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
5530400C23RikQ9D3I0 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
5530400C23RikQ9D3I0 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
5530400C23RikQ9D3I0 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
5530400C23RikQ9D3I0 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
5530400C23RikQ9D3I0 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
5530400C23RikQ9D3I0 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
5530400C23RikQ9D3I0 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.56■□□□□ 0.4
5530400C23RikQ9D3I0 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.56■□□□□ 0.4
5530400C23RikQ9D3I0 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
5530400C23RikQ9D3I0 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.56■□□□□ 0.4
5530400C23RikQ9D3I0 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
5530400C23RikQ9D3I0 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
5530400C23RikQ9D3I0 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
5530400C23RikQ9D3I0 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
5530400C23RikQ9D3I0 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
5530400C23RikQ9D3I0 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
5530400C23RikQ9D3I0 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
5530400C23RikQ9D3I0 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
5530400C23RikQ9D3I0 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
5530400C23RikQ9D3I0 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
5530400C23RikQ9D3I0 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
5530400C23RikQ9D3I0 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
5530400C23RikQ9D3I0 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
5530400C23RikQ9D3I0 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.55■□□□□ 0.4
5530400C23RikQ9D3I0 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
5530400C23RikQ9D3I0 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
5530400C23RikQ9D3I0 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.55■□□□□ 0.4
5530400C23RikQ9D3I0 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.55■□□□□ 0.4
5530400C23RikQ9D3I0 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
5530400C23RikQ9D3I0 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
5530400C23RikQ9D3I0 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.55■□□□□ 0.4
5530400C23RikQ9D3I0 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
5530400C23RikQ9D3I0 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
5530400C23RikQ9D3I0 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
5530400C23RikQ9D3I0 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
5530400C23RikQ9D3I0 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
5530400C23RikQ9D3I0 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
5530400C23RikQ9D3I0 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
5530400C23RikQ9D3I0 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
5530400C23RikQ9D3I0 Flg-201ENSMUST00000050758 1488 ntBASIC17.55■□□□□ 0.4
5530400C23RikQ9D3I0 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.55■□□□□ 0.4
5530400C23RikQ9D3I0 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.55■□□□□ 0.4
5530400C23RikQ9D3I0 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
5530400C23RikQ9D3I0 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
5530400C23RikQ9D3I0 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
5530400C23RikQ9D3I0 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
5530400C23RikQ9D3I0 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
5530400C23RikQ9D3I0 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.54■□□□□ 0.4
5530400C23RikQ9D3I0 Gm2559-201ENSMUST00000201323 363 ntBASIC17.54■□□□□ 0.4
5530400C23RikQ9D3I0 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.54■□□□□ 0.4
5530400C23RikQ9D3I0 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
5530400C23RikQ9D3I0 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
5530400C23RikQ9D3I0 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
5530400C23RikQ9D3I0 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
5530400C23RikQ9D3I0 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
5530400C23RikQ9D3I0 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
5530400C23RikQ9D3I0 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
5530400C23RikQ9D3I0 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
5530400C23RikQ9D3I0 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.53■□□□□ 0.4
5530400C23RikQ9D3I0 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
5530400C23RikQ9D3I0 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
5530400C23RikQ9D3I0 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
5530400C23RikQ9D3I0 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
5530400C23RikQ9D3I0 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
5530400C23RikQ9D3I0 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
5530400C23RikQ9D3I0 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
5530400C23RikQ9D3I0 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
5530400C23RikQ9D3I0 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
5530400C23RikQ9D3I0 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
5530400C23RikQ9D3I0 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
5530400C23RikQ9D3I0 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
5530400C23RikQ9D3I0 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.53■□□□□ 0.4
5530400C23RikQ9D3I0 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
5530400C23RikQ9D3I0 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
5530400C23RikQ9D3I0 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.53■□□□□ 0.4
5530400C23RikQ9D3I0 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
5530400C23RikQ9D3I0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.53■□□□□ 0.4
5530400C23RikQ9D3I0 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
5530400C23RikQ9D3I0 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
5530400C23RikQ9D3I0 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
5530400C23RikQ9D3I0 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
5530400C23RikQ9D3I0 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
5530400C23RikQ9D3I0 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
5530400C23RikQ9D3I0 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
5530400C23RikQ9D3I0 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.52■□□□□ 0.4
5530400C23RikQ9D3I0 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
5530400C23RikQ9D3I0 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.52■□□□□ 0.4
5530400C23RikQ9D3I0 Gm12441-201ENSMUST00000121806 588 ntBASIC17.52■□□□□ 0.4
5530400C23RikQ9D3I0 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.52■□□□□ 0.4
5530400C23RikQ9D3I0 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.52■□□□□ 0.4
5530400C23RikQ9D3I0 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms