Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Vps33aQ9D2N9 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps33aQ9D2N9 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps33aQ9D2N9 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps33aQ9D2N9 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps33aQ9D2N9 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps33aQ9D2N9 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.95■□□□□ 0.62
Vps33aQ9D2N9 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps33aQ9D2N9 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps33aQ9D2N9 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps33aQ9D2N9 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Vps33aQ9D2N9 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps33aQ9D2N9 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps33aQ9D2N9 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps33aQ9D2N9 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Vps33aQ9D2N9 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Vps33aQ9D2N9 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Vps33aQ9D2N9 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Vps33aQ9D2N9 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Vps33aQ9D2N9 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Vps33aQ9D2N9 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Vps33aQ9D2N9 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.93■□□□□ 0.62
Vps33aQ9D2N9 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.93■□□□□ 0.62
Vps33aQ9D2N9 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps33aQ9D2N9 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.93■□□□□ 0.62
Vps33aQ9D2N9 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps33aQ9D2N9 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Vps33aQ9D2N9 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Vps33aQ9D2N9 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Vps33aQ9D2N9 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps33aQ9D2N9 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps33aQ9D2N9 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps33aQ9D2N9 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.92■□□□□ 0.62
Vps33aQ9D2N9 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps33aQ9D2N9 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps33aQ9D2N9 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Vps33aQ9D2N9 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps33aQ9D2N9 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.92■□□□□ 0.62
Vps33aQ9D2N9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.92■□□□□ 0.62
Vps33aQ9D2N9 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.92■□□□□ 0.62
Vps33aQ9D2N9 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps33aQ9D2N9 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps33aQ9D2N9 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Vps33aQ9D2N9 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Vps33aQ9D2N9 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Vps33aQ9D2N9 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.92■□□□□ 0.62
Vps33aQ9D2N9 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps33aQ9D2N9 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Vps33aQ9D2N9 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps33aQ9D2N9 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Vps33aQ9D2N9 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps33aQ9D2N9 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps33aQ9D2N9 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps33aQ9D2N9 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps33aQ9D2N9 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps33aQ9D2N9 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Vps33aQ9D2N9 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Vps33aQ9D2N9 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Vps33aQ9D2N9 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps33aQ9D2N9 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.91■□□□□ 0.62
Vps33aQ9D2N9 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.91■□□□□ 0.62
Vps33aQ9D2N9 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps33aQ9D2N9 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Vps33aQ9D2N9 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps33aQ9D2N9 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps33aQ9D2N9 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Vps33aQ9D2N9 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps33aQ9D2N9 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Vps33aQ9D2N9 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
Vps33aQ9D2N9 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps33aQ9D2N9 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Vps33aQ9D2N9 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Vps33aQ9D2N9 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.9■□□□□ 0.62
Vps33aQ9D2N9 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Vps33aQ9D2N9 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps33aQ9D2N9 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps33aQ9D2N9 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps33aQ9D2N9 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps33aQ9D2N9 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Vps33aQ9D2N9 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps33aQ9D2N9 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps33aQ9D2N9 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps33aQ9D2N9 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.9■□□□□ 0.62
Vps33aQ9D2N9 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.9■□□□□ 0.62
Vps33aQ9D2N9 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Vps33aQ9D2N9 Rps24-207ENSMUST00000224568 714 ntBASIC18.9■□□□□ 0.62
Vps33aQ9D2N9 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Vps33aQ9D2N9 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps33aQ9D2N9 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps33aQ9D2N9 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Vps33aQ9D2N9 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps33aQ9D2N9 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.9■□□□□ 0.62
Vps33aQ9D2N9 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps33aQ9D2N9 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.62
Vps33aQ9D2N9 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Vps33aQ9D2N9 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.89■□□□□ 0.62
Vps33aQ9D2N9 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Vps33aQ9D2N9 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Vps33aQ9D2N9 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vps33aQ9D2N9 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 161.1 ms