Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chaf1bQ9D0N7 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Chaf1bQ9D0N7 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chaf1bQ9D0N7 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.84■□□□□ 0.29
Chaf1bQ9D0N7 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
Chaf1bQ9D0N7 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chaf1bQ9D0N7 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Chaf1bQ9D0N7 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chaf1bQ9D0N7 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.84■□□□□ 0.29
Chaf1bQ9D0N7 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chaf1bQ9D0N7 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chaf1bQ9D0N7 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chaf1bQ9D0N7 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Chaf1bQ9D0N7 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Chaf1bQ9D0N7 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Chaf1bQ9D0N7 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Chaf1bQ9D0N7 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Chaf1bQ9D0N7 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Chaf1bQ9D0N7 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Chaf1bQ9D0N7 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Chaf1bQ9D0N7 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chaf1bQ9D0N7 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Chaf1bQ9D0N7 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chaf1bQ9D0N7 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chaf1bQ9D0N7 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chaf1bQ9D0N7 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chaf1bQ9D0N7 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chaf1bQ9D0N7 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chaf1bQ9D0N7 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Chaf1bQ9D0N7 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Chaf1bQ9D0N7 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chaf1bQ9D0N7 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chaf1bQ9D0N7 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Chaf1bQ9D0N7 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chaf1bQ9D0N7 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.82■□□□□ 0.28
Chaf1bQ9D0N7 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.82■□□□□ 0.28
Chaf1bQ9D0N7 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Chaf1bQ9D0N7 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chaf1bQ9D0N7 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.82■□□□□ 0.28
Chaf1bQ9D0N7 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chaf1bQ9D0N7 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chaf1bQ9D0N7 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chaf1bQ9D0N7 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Chaf1bQ9D0N7 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Chaf1bQ9D0N7 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chaf1bQ9D0N7 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.81■□□□□ 0.28
Chaf1bQ9D0N7 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chaf1bQ9D0N7 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chaf1bQ9D0N7 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chaf1bQ9D0N7 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chaf1bQ9D0N7 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chaf1bQ9D0N7 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chaf1bQ9D0N7 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chaf1bQ9D0N7 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chaf1bQ9D0N7 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.81■□□□□ 0.28
Chaf1bQ9D0N7 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chaf1bQ9D0N7 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chaf1bQ9D0N7 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chaf1bQ9D0N7 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chaf1bQ9D0N7 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chaf1bQ9D0N7 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Chaf1bQ9D0N7 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chaf1bQ9D0N7 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chaf1bQ9D0N7 Tgds-204ENSMUST00000228543 1594 ntBASIC16.81■□□□□ 0.28
Chaf1bQ9D0N7 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chaf1bQ9D0N7 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chaf1bQ9D0N7 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chaf1bQ9D0N7 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Chaf1bQ9D0N7 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chaf1bQ9D0N7 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chaf1bQ9D0N7 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.8■□□□□ 0.28
Chaf1bQ9D0N7 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Chaf1bQ9D0N7 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chaf1bQ9D0N7 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Chaf1bQ9D0N7 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.8■□□□□ 0.28
Chaf1bQ9D0N7 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chaf1bQ9D0N7 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chaf1bQ9D0N7 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chaf1bQ9D0N7 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chaf1bQ9D0N7 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chaf1bQ9D0N7 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chaf1bQ9D0N7 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chaf1bQ9D0N7 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chaf1bQ9D0N7 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Chaf1bQ9D0N7 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Chaf1bQ9D0N7 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Chaf1bQ9D0N7 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.8■□□□□ 0.28
Chaf1bQ9D0N7 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chaf1bQ9D0N7 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chaf1bQ9D0N7 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chaf1bQ9D0N7 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chaf1bQ9D0N7 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chaf1bQ9D0N7 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chaf1bQ9D0N7 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chaf1bQ9D0N7 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chaf1bQ9D0N7 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chaf1bQ9D0N7 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.79■□□□□ 0.28
Chaf1bQ9D0N7 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chaf1bQ9D0N7 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.79■□□□□ 0.28
Chaf1bQ9D0N7 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms