Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC11.78□□□□□ -0.52
Mrpl55Q9CZ83 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Mrpl55Q9CZ83 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Mrpl55Q9CZ83 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Mrpl55Q9CZ83 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC11.78□□□□□ -0.52
Mrpl55Q9CZ83 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Mrpl55Q9CZ83 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Mrpl55Q9CZ83 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Mrpl55Q9CZ83 Golph3-205ENSMUST00000228671 2842 ntBASIC11.78□□□□□ -0.52
Mrpl55Q9CZ83 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Mrpl55Q9CZ83 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Mrpl55Q9CZ83 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Mrpl55Q9CZ83 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Mrpl55Q9CZ83 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Mrpl55Q9CZ83 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Mrpl55Q9CZ83 Gm29257-201ENSMUST00000186115 639 ntBASIC11.78□□□□□ -0.52
Mrpl55Q9CZ83 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC11.78□□□□□ -0.52
Mrpl55Q9CZ83 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC11.78□□□□□ -0.52
Mrpl55Q9CZ83 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Mrpl55Q9CZ83 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Mrpl55Q9CZ83 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Mrpl55Q9CZ83 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Mrpl55Q9CZ83 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Mrpl55Q9CZ83 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Mrpl55Q9CZ83 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Mrpl55Q9CZ83 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Mrpl55Q9CZ83 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Mrpl55Q9CZ83 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Mrpl55Q9CZ83 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Mrpl55Q9CZ83 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Mrpl55Q9CZ83 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Mrpl55Q9CZ83 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Mrpl55Q9CZ83 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Mrpl55Q9CZ83 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Mrpl55Q9CZ83 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Mrpl55Q9CZ83 Gm9867-201ENSMUST00000192212 2647 ntBASIC11.77□□□□□ -0.52
Mrpl55Q9CZ83 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Mrpl55Q9CZ83 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Mrpl55Q9CZ83 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Mrpl55Q9CZ83 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Mrpl55Q9CZ83 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Mrpl55Q9CZ83 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Mrpl55Q9CZ83 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Mrpl55Q9CZ83 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Mrpl55Q9CZ83 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Mrpl55Q9CZ83 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Mrpl55Q9CZ83 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Mrpl55Q9CZ83 Gm10849-201ENSMUST00000100397 618 ntBASIC11.77□□□□□ -0.53
Mrpl55Q9CZ83 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Mrpl55Q9CZ83 Gm13234-201ENSMUST00000120010 747 ntBASIC11.77□□□□□ -0.53
Mrpl55Q9CZ83 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Mrpl55Q9CZ83 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Mrpl55Q9CZ83 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC11.77□□□□□ -0.53
Mrpl55Q9CZ83 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Mrpl55Q9CZ83 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Mrpl55Q9CZ83 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Mrpl55Q9CZ83 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Mrpl55Q9CZ83 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC11.77□□□□□ -0.53
Mrpl55Q9CZ83 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Mrpl55Q9CZ83 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Mrpl55Q9CZ83 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Mrpl55Q9CZ83 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Mrpl55Q9CZ83 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mrpl55Q9CZ83 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mrpl55Q9CZ83 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mrpl55Q9CZ83 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mrpl55Q9CZ83 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mrpl55Q9CZ83 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mrpl55Q9CZ83 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC11.76□□□□□ -0.53
Mrpl55Q9CZ83 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Mrpl55Q9CZ83 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC11.76□□□□□ -0.53
Mrpl55Q9CZ83 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mrpl55Q9CZ83 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC11.76□□□□□ -0.53
Mrpl55Q9CZ83 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC11.76□□□□□ -0.53
Mrpl55Q9CZ83 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mrpl55Q9CZ83 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Mrpl55Q9CZ83 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC11.76□□□□□ -0.53
Mrpl55Q9CZ83 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Mrpl55Q9CZ83 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Mrpl55Q9CZ83 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mrpl55Q9CZ83 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mrpl55Q9CZ83 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mrpl55Q9CZ83 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mrpl55Q9CZ83 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mrpl55Q9CZ83 Gm37352-201ENSMUST00000193908 2181 ntBASIC11.76□□□□□ -0.53
Mrpl55Q9CZ83 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Mrpl55Q9CZ83 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mrpl55Q9CZ83 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
Mrpl55Q9CZ83 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mrpl55Q9CZ83 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Mrpl55Q9CZ83 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Mrpl55Q9CZ83 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Mrpl55Q9CZ83 Reep4-203ENSMUST00000226563 1444 ntBASIC11.76□□□□□ -0.53
Mrpl55Q9CZ83 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mrpl55Q9CZ83 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mrpl55Q9CZ83 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mrpl55Q9CZ83 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Mrpl55Q9CZ83 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC11.76□□□□□ -0.53
Mrpl55Q9CZ83 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mrpl55Q9CZ83 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms