Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim13Q9CYB0 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trim13Q9CYB0 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Trim13Q9CYB0 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
Trim13Q9CYB0 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim13Q9CYB0 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Trim13Q9CYB0 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim13Q9CYB0 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.55■□□□□ 0.24
Trim13Q9CYB0 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim13Q9CYB0 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Trim13Q9CYB0 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim13Q9CYB0 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim13Q9CYB0 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Trim13Q9CYB0 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Trim13Q9CYB0 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim13Q9CYB0 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim13Q9CYB0 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim13Q9CYB0 Gm45417-201ENSMUST00000209533 758 ntBASIC16.54■□□□□ 0.24
Trim13Q9CYB0 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim13Q9CYB0 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim13Q9CYB0 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim13Q9CYB0 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim13Q9CYB0 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim13Q9CYB0 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim13Q9CYB0 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.53■□□□□ 0.24
Trim13Q9CYB0 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim13Q9CYB0 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim13Q9CYB0 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Trim13Q9CYB0 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.53■□□□□ 0.24
Trim13Q9CYB0 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.53■□□□□ 0.24
Trim13Q9CYB0 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim13Q9CYB0 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Trim13Q9CYB0 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim13Q9CYB0 Gm8493-201ENSMUST00000196881 489 ntBASIC16.53■□□□□ 0.24
Trim13Q9CYB0 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim13Q9CYB0 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim13Q9CYB0 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Trim13Q9CYB0 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.53■□□□□ 0.24
Trim13Q9CYB0 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim13Q9CYB0 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.53■□□□□ 0.24
Trim13Q9CYB0 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim13Q9CYB0 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Trim13Q9CYB0 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim13Q9CYB0 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim13Q9CYB0 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim13Q9CYB0 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trim13Q9CYB0 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim13Q9CYB0 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim13Q9CYB0 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim13Q9CYB0 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.52■□□□□ 0.24
Trim13Q9CYB0 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim13Q9CYB0 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim13Q9CYB0 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.52■□□□□ 0.24
Trim13Q9CYB0 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Trim13Q9CYB0 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trim13Q9CYB0 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim13Q9CYB0 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim13Q9CYB0 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim13Q9CYB0 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.52■□□□□ 0.24
Trim13Q9CYB0 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim13Q9CYB0 Gm38205-201ENSMUST00000192243 258 ntBASIC16.52■□□□□ 0.24
Trim13Q9CYB0 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.52■□□□□ 0.24
Trim13Q9CYB0 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.52■□□□□ 0.24
Trim13Q9CYB0 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim13Q9CYB0 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Trim13Q9CYB0 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim13Q9CYB0 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim13Q9CYB0 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.52■□□□□ 0.23
Trim13Q9CYB0 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Trim13Q9CYB0 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trim13Q9CYB0 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim13Q9CYB0 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim13Q9CYB0 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim13Q9CYB0 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.52■□□□□ 0.23
Trim13Q9CYB0 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim13Q9CYB0 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim13Q9CYB0 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Trim13Q9CYB0 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim13Q9CYB0 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim13Q9CYB0 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
Trim13Q9CYB0 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim13Q9CYB0 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim13Q9CYB0 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trim13Q9CYB0 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.51■□□□□ 0.23
Trim13Q9CYB0 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim13Q9CYB0 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim13Q9CYB0 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim13Q9CYB0 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim13Q9CYB0 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim13Q9CYB0 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.5■□□□□ 0.23
Trim13Q9CYB0 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim13Q9CYB0 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim13Q9CYB0 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim13Q9CYB0 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim13Q9CYB0 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim13Q9CYB0 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
Trim13Q9CYB0 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim13Q9CYB0 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim13Q9CYB0 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim13Q9CYB0 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms