Protein–RNA interactions for Protein: Q9CWY8

Rnaseh2a, Ribonuclease H2 subunit A, mousemouse

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnaseh2aQ9CWY8 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Rnaseh2aQ9CWY8 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rnaseh2aQ9CWY8 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rnaseh2aQ9CWY8 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Rnaseh2aQ9CWY8 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rnaseh2aQ9CWY8 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Rnaseh2aQ9CWY8 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rnaseh2aQ9CWY8 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rnaseh2aQ9CWY8 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rnaseh2aQ9CWY8 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rnaseh2aQ9CWY8 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Rnaseh2aQ9CWY8 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Rnaseh2aQ9CWY8 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Rnaseh2aQ9CWY8 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rnaseh2aQ9CWY8 AC124569.2-201ENSMUST00000225998 818 ntBASIC21.37■■□□□ 1.01
Rnaseh2aQ9CWY8 AC154621.1-201ENSMUST00000226155 1119 ntBASIC21.37■■□□□ 1.01
Rnaseh2aQ9CWY8 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rnaseh2aQ9CWY8 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Rnaseh2aQ9CWY8 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rnaseh2aQ9CWY8 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rnaseh2aQ9CWY8 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.37■■□□□ 1.01
Rnaseh2aQ9CWY8 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Rnaseh2aQ9CWY8 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
Rnaseh2aQ9CWY8 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rnaseh2aQ9CWY8 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.36■■□□□ 1.01
Rnaseh2aQ9CWY8 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rnaseh2aQ9CWY8 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Rnaseh2aQ9CWY8 Gm12895-201ENSMUST00000122214 226 ntBASIC21.36■■□□□ 1.01
Rnaseh2aQ9CWY8 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rnaseh2aQ9CWY8 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Rnaseh2aQ9CWY8 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rnaseh2aQ9CWY8 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Rnaseh2aQ9CWY8 Il3ra-202ENSMUST00000223589 738 ntBASIC21.35■■□□□ 1.01
Rnaseh2aQ9CWY8 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC21.35■■□□□ 1.01
Rnaseh2aQ9CWY8 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Rnaseh2aQ9CWY8 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Rnaseh2aQ9CWY8 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rnaseh2aQ9CWY8 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Rnaseh2aQ9CWY8 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rnaseh2aQ9CWY8 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rnaseh2aQ9CWY8 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Rnaseh2aQ9CWY8 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
Rnaseh2aQ9CWY8 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rnaseh2aQ9CWY8 Gm10418-201ENSMUST00000100943 576 ntBASIC21.34■■□□□ 1.01
Rnaseh2aQ9CWY8 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Rnaseh2aQ9CWY8 Gm11594-201ENSMUST00000122313 162 ntBASIC21.34■■□□□ 1.01
Rnaseh2aQ9CWY8 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC21.34■■□□□ 1.01
Rnaseh2aQ9CWY8 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rnaseh2aQ9CWY8 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rnaseh2aQ9CWY8 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Rnaseh2aQ9CWY8 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC21.33■■□□□ 1.01
Rnaseh2aQ9CWY8 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rnaseh2aQ9CWY8 Gm2213-201ENSMUST00000197485 688 ntBASIC21.33■■□□□ 1.01
Rnaseh2aQ9CWY8 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC21.33■■□□□ 1.01
Rnaseh2aQ9CWY8 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Rnaseh2aQ9CWY8 Gm9449-201ENSMUST00000207265 1011 ntBASIC21.33■■□□□ 1.01
Rnaseh2aQ9CWY8 Gm9731-201ENSMUST00000209480 747 ntBASIC21.33■■□□□ 1.01
Rnaseh2aQ9CWY8 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Rnaseh2aQ9CWY8 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC21.33■■□□□ 1.01
Rnaseh2aQ9CWY8 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rnaseh2aQ9CWY8 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rnaseh2aQ9CWY8 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC21.32■■□□□ 1
Rnaseh2aQ9CWY8 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Rnaseh2aQ9CWY8 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
Rnaseh2aQ9CWY8 Gm13401-201ENSMUST00000117074 291 ntBASIC21.32■■□□□ 1
Rnaseh2aQ9CWY8 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC21.32■■□□□ 1
Rnaseh2aQ9CWY8 Gm2651-201ENSMUST00000203560 838 ntBASIC21.32■■□□□ 1
Rnaseh2aQ9CWY8 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rnaseh2aQ9CWY8 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Rnaseh2aQ9CWY8 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Rnaseh2aQ9CWY8 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC21.32■■□□□ 1
Rnaseh2aQ9CWY8 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC21.32■■□□□ 1
Rnaseh2aQ9CWY8 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC21.32■■□□□ 1
Rnaseh2aQ9CWY8 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Rnaseh2aQ9CWY8 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rnaseh2aQ9CWY8 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Rnaseh2aQ9CWY8 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rnaseh2aQ9CWY8 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC21.31■■□□□ 1
Rnaseh2aQ9CWY8 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Rnaseh2aQ9CWY8 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC21.31■■□□□ 1
Rnaseh2aQ9CWY8 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC21.31■■□□□ 1
Rnaseh2aQ9CWY8 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rnaseh2aQ9CWY8 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC21.31■■□□□ 1
Rnaseh2aQ9CWY8 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Rnaseh2aQ9CWY8 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC21.31■■□□□ 1
Rnaseh2aQ9CWY8 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC21.31■■□□□ 1
Rnaseh2aQ9CWY8 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rnaseh2aQ9CWY8 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rnaseh2aQ9CWY8 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Rnaseh2aQ9CWY8 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rnaseh2aQ9CWY8 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rnaseh2aQ9CWY8 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Rnaseh2aQ9CWY8 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
Rnaseh2aQ9CWY8 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.3■■□□□ 1
Rnaseh2aQ9CWY8 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC21.3■■□□□ 1
Rnaseh2aQ9CWY8 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rnaseh2aQ9CWY8 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC21.3■■□□□ 1
Rnaseh2aQ9CWY8 AC120002.2-201ENSMUST00000220205 773 ntBASIC21.3■■□□□ 1
Rnaseh2aQ9CWY8 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC21.3■■□□□ 1
Rnaseh2aQ9CWY8 AC159301.1-201ENSMUST00000225130 1182 ntBASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms