Protein–RNA interactions for Protein: Q99PM3

Gtf2a1, Transcription initiation factor IIA subunit 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1Q99PM3 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.82■□□□□ 0.76
Gtf2a1Q99PM3 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gtf2a1Q99PM3 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Gtf2a1Q99PM3 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Gtf2a1Q99PM3 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gtf2a1Q99PM3 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Gtf2a1Q99PM3 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC19.81■□□□□ 0.76
Gtf2a1Q99PM3 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gtf2a1Q99PM3 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gtf2a1Q99PM3 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.81■□□□□ 0.76
Gtf2a1Q99PM3 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gtf2a1Q99PM3 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Gtf2a1Q99PM3 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gtf2a1Q99PM3 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gtf2a1Q99PM3 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gtf2a1Q99PM3 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gtf2a1Q99PM3 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gtf2a1Q99PM3 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gtf2a1Q99PM3 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gtf2a1Q99PM3 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Gtf2a1Q99PM3 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gtf2a1Q99PM3 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.8■□□□□ 0.76
Gtf2a1Q99PM3 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gtf2a1Q99PM3 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Gtf2a1Q99PM3 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
Gtf2a1Q99PM3 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Gtf2a1Q99PM3 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gtf2a1Q99PM3 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC19.8■□□□□ 0.76
Gtf2a1Q99PM3 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.8■□□□□ 0.76
Gtf2a1Q99PM3 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gtf2a1Q99PM3 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Gtf2a1Q99PM3 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Gtf2a1Q99PM3 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Gtf2a1Q99PM3 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gtf2a1Q99PM3 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Gtf2a1Q99PM3 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Gtf2a1Q99PM3 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Gtf2a1Q99PM3 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.79■□□□□ 0.76
Gtf2a1Q99PM3 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gtf2a1Q99PM3 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC19.79■□□□□ 0.76
Gtf2a1Q99PM3 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gtf2a1Q99PM3 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gtf2a1Q99PM3 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Gtf2a1Q99PM3 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Gtf2a1Q99PM3 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.79■□□□□ 0.76
Gtf2a1Q99PM3 Mir3960-201ENSMUST00000198213 73 ntBASIC19.79■□□□□ 0.76
Gtf2a1Q99PM3 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Gtf2a1Q99PM3 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gtf2a1Q99PM3 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gtf2a1Q99PM3 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Gtf2a1Q99PM3 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Gtf2a1Q99PM3 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gtf2a1Q99PM3 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gtf2a1Q99PM3 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC19.78■□□□□ 0.76
Gtf2a1Q99PM3 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gtf2a1Q99PM3 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gtf2a1Q99PM3 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gtf2a1Q99PM3 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gtf2a1Q99PM3 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gtf2a1Q99PM3 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Gtf2a1Q99PM3 Mir6236-201ENSMUST00000184437 123 ntBASIC19.78■□□□□ 0.76
Gtf2a1Q99PM3 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Gtf2a1Q99PM3 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gtf2a1Q99PM3 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gtf2a1Q99PM3 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Gtf2a1Q99PM3 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gtf2a1Q99PM3 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gtf2a1Q99PM3 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gtf2a1Q99PM3 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Gtf2a1Q99PM3 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gtf2a1Q99PM3 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gtf2a1Q99PM3 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gtf2a1Q99PM3 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC19.77■□□□□ 0.76
Gtf2a1Q99PM3 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gtf2a1Q99PM3 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gtf2a1Q99PM3 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Gtf2a1Q99PM3 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gtf2a1Q99PM3 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gtf2a1Q99PM3 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
Gtf2a1Q99PM3 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
Gtf2a1Q99PM3 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC19.77■□□□□ 0.75
Gtf2a1Q99PM3 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gtf2a1Q99PM3 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gtf2a1Q99PM3 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gtf2a1Q99PM3 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gtf2a1Q99PM3 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Gtf2a1Q99PM3 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Gtf2a1Q99PM3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.76■□□□□ 0.75
Gtf2a1Q99PM3 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gtf2a1Q99PM3 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Gtf2a1Q99PM3 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gtf2a1Q99PM3 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Gtf2a1Q99PM3 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gtf2a1Q99PM3 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC19.76■□□□□ 0.75
Gtf2a1Q99PM3 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gtf2a1Q99PM3 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gtf2a1Q99PM3 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gtf2a1Q99PM3 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gtf2a1Q99PM3 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gtf2a1Q99PM3 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms