Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Chmp1b1Q99LU0 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp1b1Q99LU0 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Chmp1b1Q99LU0 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.91■□□□□ 0.3
Chmp1b1Q99LU0 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp1b1Q99LU0 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Chmp1b1Q99LU0 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.9■□□□□ 0.3
Chmp1b1Q99LU0 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp1b1Q99LU0 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp1b1Q99LU0 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Chmp1b1Q99LU0 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp1b1Q99LU0 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp1b1Q99LU0 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Chmp1b1Q99LU0 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp1b1Q99LU0 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp1b1Q99LU0 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Chmp1b1Q99LU0 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Chmp1b1Q99LU0 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
Chmp1b1Q99LU0 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Chmp1b1Q99LU0 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp1b1Q99LU0 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp1b1Q99LU0 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp1b1Q99LU0 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
Chmp1b1Q99LU0 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp1b1Q99LU0 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp1b1Q99LU0 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.89■□□□□ 0.29
Chmp1b1Q99LU0 Gm29257-201ENSMUST00000186115 639 ntBASIC16.89■□□□□ 0.29
Chmp1b1Q99LU0 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.89■□□□□ 0.29
Chmp1b1Q99LU0 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.89■□□□□ 0.29
Chmp1b1Q99LU0 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Chmp1b1Q99LU0 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Chmp1b1Q99LU0 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp1b1Q99LU0 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp1b1Q99LU0 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp1b1Q99LU0 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp1b1Q99LU0 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp1b1Q99LU0 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.88■□□□□ 0.29
Chmp1b1Q99LU0 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp1b1Q99LU0 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp1b1Q99LU0 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp1b1Q99LU0 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.88■□□□□ 0.29
Chmp1b1Q99LU0 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp1b1Q99LU0 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.88■□□□□ 0.29
Chmp1b1Q99LU0 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Chmp1b1Q99LU0 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp1b1Q99LU0 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp1b1Q99LU0 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp1b1Q99LU0 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Chmp1b1Q99LU0 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp1b1Q99LU0 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp1b1Q99LU0 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp1b1Q99LU0 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp1b1Q99LU0 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp1b1Q99LU0 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp1b1Q99LU0 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Chmp1b1Q99LU0 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Chmp1b1Q99LU0 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp1b1Q99LU0 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Chmp1b1Q99LU0 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Chmp1b1Q99LU0 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp1b1Q99LU0 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp1b1Q99LU0 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Chmp1b1Q99LU0 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp1b1Q99LU0 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp1b1Q99LU0 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp1b1Q99LU0 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Chmp1b1Q99LU0 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp1b1Q99LU0 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp1b1Q99LU0 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp1b1Q99LU0 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.87■□□□□ 0.29
Chmp1b1Q99LU0 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp1b1Q99LU0 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp1b1Q99LU0 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Chmp1b1Q99LU0 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.86■□□□□ 0.29
Chmp1b1Q99LU0 Gm12933-201ENSMUST00000120203 872 ntBASIC16.86■□□□□ 0.29
Chmp1b1Q99LU0 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.86■□□□□ 0.29
Chmp1b1Q99LU0 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.86■□□□□ 0.29
Chmp1b1Q99LU0 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.86■□□□□ 0.29
Chmp1b1Q99LU0 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp1b1Q99LU0 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp1b1Q99LU0 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp1b1Q99LU0 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp1b1Q99LU0 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.86■□□□□ 0.29
Chmp1b1Q99LU0 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp1b1Q99LU0 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp1b1Q99LU0 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp1b1Q99LU0 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp1b1Q99LU0 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Chmp1b1Q99LU0 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Chmp1b1Q99LU0 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Chmp1b1Q99LU0 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp1b1Q99LU0 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp1b1Q99LU0 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp1b1Q99LU0 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp1b1Q99LU0 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp1b1Q99LU0 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Chmp1b1Q99LU0 Gm7290-201ENSMUST00000104990 617 ntBASIC16.85■□□□□ 0.29
Chmp1b1Q99LU0 Gm12918-201ENSMUST00000120234 636 ntBASIC16.85■□□□□ 0.29
Chmp1b1Q99LU0 Gm15710-201ENSMUST00000121821 636 ntBASIC16.85■□□□□ 0.29
Chmp1b1Q99LU0 Mir5133-201ENSMUST00000174955 77 ntBASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms