Protein–RNA interactions for Protein: Q96EQ9

Prdm9, Histone-lysine N-methyltransferase PRDM9, mousemouse

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm9Q96EQ9 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Prdm9Q96EQ9 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Prdm9Q96EQ9 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Prdm9Q96EQ9 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Prdm9Q96EQ9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prdm9Q96EQ9 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prdm9Q96EQ9 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prdm9Q96EQ9 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prdm9Q96EQ9 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prdm9Q96EQ9 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prdm9Q96EQ9 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Prdm9Q96EQ9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Prdm9Q96EQ9 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.57■□□□□ 0.4
Prdm9Q96EQ9 Gm37055-201ENSMUST00000191866 133 ntBASIC17.57■□□□□ 0.4
Prdm9Q96EQ9 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.57■□□□□ 0.4
Prdm9Q96EQ9 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prdm9Q96EQ9 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Prdm9Q96EQ9 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.57■□□□□ 0.4
Prdm9Q96EQ9 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Prdm9Q96EQ9 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.56■□□□□ 0.4
Prdm9Q96EQ9 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prdm9Q96EQ9 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Prdm9Q96EQ9 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Prdm9Q96EQ9 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prdm9Q96EQ9 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prdm9Q96EQ9 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prdm9Q96EQ9 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prdm9Q96EQ9 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prdm9Q96EQ9 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prdm9Q96EQ9 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.56■□□□□ 0.4
Prdm9Q96EQ9 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Prdm9Q96EQ9 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Prdm9Q96EQ9 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Prdm9Q96EQ9 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prdm9Q96EQ9 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prdm9Q96EQ9 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Prdm9Q96EQ9 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prdm9Q96EQ9 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prdm9Q96EQ9 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Prdm9Q96EQ9 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prdm9Q96EQ9 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prdm9Q96EQ9 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Prdm9Q96EQ9 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Prdm9Q96EQ9 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prdm9Q96EQ9 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Prdm9Q96EQ9 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prdm9Q96EQ9 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prdm9Q96EQ9 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prdm9Q96EQ9 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prdm9Q96EQ9 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prdm9Q96EQ9 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Prdm9Q96EQ9 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prdm9Q96EQ9 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Prdm9Q96EQ9 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.55■□□□□ 0.4
Prdm9Q96EQ9 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Prdm9Q96EQ9 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.55■□□□□ 0.4
Prdm9Q96EQ9 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.55■□□□□ 0.4
Prdm9Q96EQ9 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prdm9Q96EQ9 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Prdm9Q96EQ9 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prdm9Q96EQ9 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prdm9Q96EQ9 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prdm9Q96EQ9 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prdm9Q96EQ9 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prdm9Q96EQ9 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prdm9Q96EQ9 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prdm9Q96EQ9 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Prdm9Q96EQ9 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.54■□□□□ 0.4
Prdm9Q96EQ9 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prdm9Q96EQ9 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Prdm9Q96EQ9 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.54■□□□□ 0.4
Prdm9Q96EQ9 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Prdm9Q96EQ9 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.54■□□□□ 0.4
Prdm9Q96EQ9 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Prdm9Q96EQ9 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.54■□□□□ 0.4
Prdm9Q96EQ9 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prdm9Q96EQ9 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Prdm9Q96EQ9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prdm9Q96EQ9 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prdm9Q96EQ9 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.53■□□□□ 0.4
Prdm9Q96EQ9 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prdm9Q96EQ9 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prdm9Q96EQ9 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prdm9Q96EQ9 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prdm9Q96EQ9 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Prdm9Q96EQ9 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Prdm9Q96EQ9 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.53■□□□□ 0.4
Prdm9Q96EQ9 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prdm9Q96EQ9 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.53■□□□□ 0.4
Prdm9Q96EQ9 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prdm9Q96EQ9 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prdm9Q96EQ9 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prdm9Q96EQ9 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Prdm9Q96EQ9 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prdm9Q96EQ9 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prdm9Q96EQ9 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Prdm9Q96EQ9 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prdm9Q96EQ9 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prdm9Q96EQ9 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prdm9Q96EQ9 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms