Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdha11Q91Y19 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdha11Q91Y19 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdha11Q91Y19 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdha11Q91Y19 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdha11Q91Y19 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdha11Q91Y19 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdha11Q91Y19 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdha11Q91Y19 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Pcdha11Q91Y19 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdha11Q91Y19 Gm42545-201ENSMUST00000202755 922 ntBASIC18.78■□□□□ 0.6
Pcdha11Q91Y19 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.78■□□□□ 0.6
Pcdha11Q91Y19 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdha11Q91Y19 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdha11Q91Y19 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Pcdha11Q91Y19 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdha11Q91Y19 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdha11Q91Y19 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdha11Q91Y19 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Pcdha11Q91Y19 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdha11Q91Y19 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdha11Q91Y19 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
Pcdha11Q91Y19 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Pcdha11Q91Y19 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdha11Q91Y19 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdha11Q91Y19 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.77■□□□□ 0.6
Pcdha11Q91Y19 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdha11Q91Y19 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdha11Q91Y19 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdha11Q91Y19 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.77■□□□□ 0.6
Pcdha11Q91Y19 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdha11Q91Y19 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.76■□□□□ 0.59
Pcdha11Q91Y19 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Pcdha11Q91Y19 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.76■□□□□ 0.59
Pcdha11Q91Y19 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdha11Q91Y19 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdha11Q91Y19 Mir2861-201ENSMUST00000175539 82 ntBASIC18.76■□□□□ 0.59
Pcdha11Q91Y19 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdha11Q91Y19 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdha11Q91Y19 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdha11Q91Y19 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdha11Q91Y19 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdha11Q91Y19 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
Pcdha11Q91Y19 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Pcdha11Q91Y19 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.75■□□□□ 0.59
Pcdha11Q91Y19 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdha11Q91Y19 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdha11Q91Y19 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdha11Q91Y19 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdha11Q91Y19 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.75■□□□□ 0.59
Pcdha11Q91Y19 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.75■□□□□ 0.59
Pcdha11Q91Y19 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.75■□□□□ 0.59
Pcdha11Q91Y19 Gm6576-201ENSMUST00000169678 883 ntBASIC18.75■□□□□ 0.59
Pcdha11Q91Y19 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.75■□□□□ 0.59
Pcdha11Q91Y19 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.75■□□□□ 0.59
Pcdha11Q91Y19 Gm43183-201ENSMUST00000200632 547 ntBASIC18.75■□□□□ 0.59
Pcdha11Q91Y19 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.75■□□□□ 0.59
Pcdha11Q91Y19 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdha11Q91Y19 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdha11Q91Y19 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha11Q91Y19 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha11Q91Y19 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Pcdha11Q91Y19 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Pcdha11Q91Y19 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha11Q91Y19 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.74■□□□□ 0.59
Pcdha11Q91Y19 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha11Q91Y19 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha11Q91Y19 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha11Q91Y19 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha11Q91Y19 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha11Q91Y19 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha11Q91Y19 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha11Q91Y19 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Pcdha11Q91Y19 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha11Q91Y19 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha11Q91Y19 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha11Q91Y19 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Pcdha11Q91Y19 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha11Q91Y19 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.73■□□□□ 0.59
Pcdha11Q91Y19 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha11Q91Y19 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha11Q91Y19 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Pcdha11Q91Y19 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha11Q91Y19 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.73■□□□□ 0.59
Pcdha11Q91Y19 Gm10252-201ENSMUST00000209541 832 ntBASIC18.73■□□□□ 0.59
Pcdha11Q91Y19 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Pcdha11Q91Y19 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.73■□□□□ 0.59
Pcdha11Q91Y19 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha11Q91Y19 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha11Q91Y19 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha11Q91Y19 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdha11Q91Y19 Fst-202ENSMUST00000223640 2612 ntBASIC18.72■□□□□ 0.59
Pcdha11Q91Y19 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdha11Q91Y19 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdha11Q91Y19 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.72■□□□□ 0.59
Pcdha11Q91Y19 Gm12382-201ENSMUST00000122005 922 ntBASIC18.72■□□□□ 0.59
Pcdha11Q91Y19 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.72■□□□□ 0.59
Pcdha11Q91Y19 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Pcdha11Q91Y19 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Pcdha11Q91Y19 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms