Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Gm10653-202ENSMUST00000139570 835 ntBASIC18.7■□□□□ 0.58
Pcdha3Q91Y16 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.7■□□□□ 0.58
Pcdha3Q91Y16 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.7■□□□□ 0.58
Pcdha3Q91Y16 Trmt13-210ENSMUST00000198454 880 ntBASIC18.7■□□□□ 0.58
Pcdha3Q91Y16 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdha3Q91Y16 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdha3Q91Y16 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdha3Q91Y16 Flg-201ENSMUST00000050758 1488 ntBASIC18.7■□□□□ 0.58
Pcdha3Q91Y16 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdha3Q91Y16 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdha3Q91Y16 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdha3Q91Y16 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Pcdha3Q91Y16 Dio3-201ENSMUST00000097228 1449 ntBASIC18.69■□□□□ 0.58
Pcdha3Q91Y16 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Pcdha3Q91Y16 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdha3Q91Y16 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Pcdha3Q91Y16 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.69■□□□□ 0.58
Pcdha3Q91Y16 Gm37856-201ENSMUST00000191634 999 ntBASIC18.69■□□□□ 0.58
Pcdha3Q91Y16 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdha3Q91Y16 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdha3Q91Y16 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.69■□□□□ 0.58
Pcdha3Q91Y16 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdha3Q91Y16 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Pcdha3Q91Y16 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdha3Q91Y16 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdha3Q91Y16 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Pcdha3Q91Y16 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdha3Q91Y16 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdha3Q91Y16 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdha3Q91Y16 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdha3Q91Y16 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdha3Q91Y16 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Pcdha3Q91Y16 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Pcdha3Q91Y16 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Pcdha3Q91Y16 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Pcdha3Q91Y16 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdha3Q91Y16 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.68■□□□□ 0.58
Pcdha3Q91Y16 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdha3Q91Y16 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdha3Q91Y16 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.68■□□□□ 0.58
Pcdha3Q91Y16 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdha3Q91Y16 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.68■□□□□ 0.58
Pcdha3Q91Y16 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdha3Q91Y16 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.67■□□□□ 0.58
Pcdha3Q91Y16 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdha3Q91Y16 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.67■□□□□ 0.58
Pcdha3Q91Y16 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdha3Q91Y16 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.67■□□□□ 0.58
Pcdha3Q91Y16 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdha3Q91Y16 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.67■□□□□ 0.58
Pcdha3Q91Y16 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.67■□□□□ 0.58
Pcdha3Q91Y16 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdha3Q91Y16 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdha3Q91Y16 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdha3Q91Y16 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdha3Q91Y16 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdha3Q91Y16 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Pcdha3Q91Y16 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdha3Q91Y16 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdha3Q91Y16 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdha3Q91Y16 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Pcdha3Q91Y16 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.66■□□□□ 0.58
Pcdha3Q91Y16 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdha3Q91Y16 Gm8520-201ENSMUST00000186517 868 ntBASIC18.66■□□□□ 0.58
Pcdha3Q91Y16 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.66■□□□□ 0.58
Pcdha3Q91Y16 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdha3Q91Y16 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdha3Q91Y16 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdha3Q91Y16 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdha3Q91Y16 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Pcdha3Q91Y16 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdha3Q91Y16 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdha3Q91Y16 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdha3Q91Y16 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdha3Q91Y16 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdha3Q91Y16 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.65■□□□□ 0.58
Pcdha3Q91Y16 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdha3Q91Y16 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdha3Q91Y16 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.65■□□□□ 0.58
Pcdha3Q91Y16 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Pcdha3Q91Y16 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdha3Q91Y16 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdha3Q91Y16 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdha3Q91Y16 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdha3Q91Y16 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.65■□□□□ 0.58
Pcdha3Q91Y16 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdha3Q91Y16 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Pcdha3Q91Y16 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdha3Q91Y16 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdha3Q91Y16 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdha3Q91Y16 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdha3Q91Y16 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdha3Q91Y16 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdha3Q91Y16 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.64■□□□□ 0.57
Pcdha3Q91Y16 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdha3Q91Y16 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdha3Q91Y16 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdha3Q91Y16 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdha3Q91Y16 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdha3Q91Y16 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms