Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhga4Q91XY4 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.59■□□□□ 0.41
Pcdhga4Q91XY4 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhga4Q91XY4 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhga4Q91XY4 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Pcdhga4Q91XY4 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhga4Q91XY4 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.59■□□□□ 0.41
Pcdhga4Q91XY4 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhga4Q91XY4 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhga4Q91XY4 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Pcdhga4Q91XY4 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhga4Q91XY4 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhga4Q91XY4 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhga4Q91XY4 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhga4Q91XY4 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhga4Q91XY4 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Pcdhga4Q91XY4 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.58■□□□□ 0.41
Pcdhga4Q91XY4 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhga4Q91XY4 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
Pcdhga4Q91XY4 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhga4Q91XY4 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhga4Q91XY4 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.58■□□□□ 0.4
Pcdhga4Q91XY4 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhga4Q91XY4 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhga4Q91XY4 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhga4Q91XY4 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhga4Q91XY4 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhga4Q91XY4 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhga4Q91XY4 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhga4Q91XY4 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Pcdhga4Q91XY4 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Pcdhga4Q91XY4 Gm10653-202ENSMUST00000139570 835 ntBASIC17.57■□□□□ 0.4
Pcdhga4Q91XY4 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.57■□□□□ 0.4
Pcdhga4Q91XY4 Trmt13-210ENSMUST00000198454 880 ntBASIC17.57■□□□□ 0.4
Pcdhga4Q91XY4 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhga4Q91XY4 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Pcdhga4Q91XY4 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.57■□□□□ 0.4
Pcdhga4Q91XY4 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhga4Q91XY4 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhga4Q91XY4 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhga4Q91XY4 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga4Q91XY4 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga4Q91XY4 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.56■□□□□ 0.4
Pcdhga4Q91XY4 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga4Q91XY4 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga4Q91XY4 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga4Q91XY4 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga4Q91XY4 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga4Q91XY4 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga4Q91XY4 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga4Q91XY4 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Pcdhga4Q91XY4 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga4Q91XY4 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga4Q91XY4 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga4Q91XY4 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga4Q91XY4 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga4Q91XY4 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga4Q91XY4 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Pcdhga4Q91XY4 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga4Q91XY4 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga4Q91XY4 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhga4Q91XY4 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhga4Q91XY4 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.55■□□□□ 0.4
Pcdhga4Q91XY4 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhga4Q91XY4 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.55■□□□□ 0.4
Pcdhga4Q91XY4 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhga4Q91XY4 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhga4Q91XY4 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhga4Q91XY4 Gm12896-201ENSMUST00000118430 226 ntBASIC17.55■□□□□ 0.4
Pcdhga4Q91XY4 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhga4Q91XY4 Gm37856-201ENSMUST00000191634 999 ntBASIC17.55■□□□□ 0.4
Pcdhga4Q91XY4 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.55■□□□□ 0.4
Pcdhga4Q91XY4 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhga4Q91XY4 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhga4Q91XY4 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhga4Q91XY4 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhga4Q91XY4 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhga4Q91XY4 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhga4Q91XY4 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.55■□□□□ 0.4
Pcdhga4Q91XY4 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhga4Q91XY4 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhga4Q91XY4 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.54■□□□□ 0.4
Pcdhga4Q91XY4 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Pcdhga4Q91XY4 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhga4Q91XY4 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhga4Q91XY4 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Pcdhga4Q91XY4 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhga4Q91XY4 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhga4Q91XY4 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhga4Q91XY4 Gm2399-201ENSMUST00000104944 225 ntBASIC17.54■□□□□ 0.4
Pcdhga4Q91XY4 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.54■□□□□ 0.4
Pcdhga4Q91XY4 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhga4Q91XY4 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Pcdhga4Q91XY4 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhga4Q91XY4 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Pcdhga4Q91XY4 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhga4Q91XY4 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.54■□□□□ 0.4
Pcdhga4Q91XY4 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhga4Q91XY4 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhga4Q91XY4 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms