Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhga9Q91XX9 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhga9Q91XX9 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhga9Q91XX9 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Pcdhga9Q91XX9 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Pcdhga9Q91XX9 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhga9Q91XX9 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhga9Q91XX9 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhga9Q91XX9 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
Pcdhga9Q91XX9 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhga9Q91XX9 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Pcdhga9Q91XX9 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhga9Q91XX9 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.69■□□□□ 0.42
Pcdhga9Q91XX9 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.69■□□□□ 0.42
Pcdhga9Q91XX9 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga9Q91XX9 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga9Q91XX9 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga9Q91XX9 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga9Q91XX9 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.68■□□□□ 0.42
Pcdhga9Q91XX9 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga9Q91XX9 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Pcdhga9Q91XX9 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga9Q91XX9 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.68■□□□□ 0.42
Pcdhga9Q91XX9 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Pcdhga9Q91XX9 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga9Q91XX9 Fst-202ENSMUST00000223640 2612 ntBASIC17.68■□□□□ 0.42
Pcdhga9Q91XX9 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga9Q91XX9 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga9Q91XX9 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga9Q91XX9 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga9Q91XX9 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga9Q91XX9 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Pcdhga9Q91XX9 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga9Q91XX9 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga9Q91XX9 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga9Q91XX9 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga9Q91XX9 Dio3-201ENSMUST00000097228 1449 ntBASIC17.67■□□□□ 0.42
Pcdhga9Q91XX9 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.67■□□□□ 0.42
Pcdhga9Q91XX9 Gm11927-201ENSMUST00000118472 759 ntBASIC17.67■□□□□ 0.42
Pcdhga9Q91XX9 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.67■□□□□ 0.42
Pcdhga9Q91XX9 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga9Q91XX9 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga9Q91XX9 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga9Q91XX9 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga9Q91XX9 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga9Q91XX9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga9Q91XX9 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga9Q91XX9 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga9Q91XX9 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga9Q91XX9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga9Q91XX9 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.66■□□□□ 0.42
Pcdhga9Q91XX9 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Pcdhga9Q91XX9 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga9Q91XX9 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga9Q91XX9 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga9Q91XX9 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga9Q91XX9 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.66■□□□□ 0.42
Pcdhga9Q91XX9 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Pcdhga9Q91XX9 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Pcdhga9Q91XX9 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.66■□□□□ 0.42
Pcdhga9Q91XX9 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga9Q91XX9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Pcdhga9Q91XX9 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Pcdhga9Q91XX9 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Pcdhga9Q91XX9 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga9Q91XX9 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga9Q91XX9 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga9Q91XX9 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga9Q91XX9 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga9Q91XX9 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
Pcdhga9Q91XX9 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga9Q91XX9 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.65■□□□□ 0.42
Pcdhga9Q91XX9 Gm5643-201ENSMUST00000117081 966 ntBASIC17.65■□□□□ 0.42
Pcdhga9Q91XX9 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.65■□□□□ 0.42
Pcdhga9Q91XX9 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga9Q91XX9 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga9Q91XX9 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga9Q91XX9 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga9Q91XX9 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga9Q91XX9 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.65■□□□□ 0.42
Pcdhga9Q91XX9 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga9Q91XX9 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga9Q91XX9 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga9Q91XX9 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdhga9Q91XX9 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhga9Q91XX9 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.64■□□□□ 0.41
Pcdhga9Q91XX9 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhga9Q91XX9 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.64■□□□□ 0.41
Pcdhga9Q91XX9 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Pcdhga9Q91XX9 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhga9Q91XX9 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhga9Q91XX9 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhga9Q91XX9 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
Pcdhga9Q91XX9 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhga9Q91XX9 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhga9Q91XX9 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhga9Q91XX9 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhga9Q91XX9 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhga9Q91XX9 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.64■□□□□ 0.41
Pcdhga9Q91XX9 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms