Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhgb1Q91XX8 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhgb1Q91XX8 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.56■□□□□ 0.56
Pcdhgb1Q91XX8 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhgb1Q91XX8 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.56■□□□□ 0.56
Pcdhgb1Q91XX8 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhgb1Q91XX8 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhgb1Q91XX8 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Pcdhgb1Q91XX8 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhgb1Q91XX8 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhgb1Q91XX8 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Pcdhgb1Q91XX8 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.56■□□□□ 0.56
Pcdhgb1Q91XX8 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhgb1Q91XX8 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhgb1Q91XX8 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.55■□□□□ 0.56
Pcdhgb1Q91XX8 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.55■□□□□ 0.56
Pcdhgb1Q91XX8 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhgb1Q91XX8 Gm37055-201ENSMUST00000191866 133 ntBASIC18.55■□□□□ 0.56
Pcdhgb1Q91XX8 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhgb1Q91XX8 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhgb1Q91XX8 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.55■□□□□ 0.56
Pcdhgb1Q91XX8 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Pcdhgb1Q91XX8 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhgb1Q91XX8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhgb1Q91XX8 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhgb1Q91XX8 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgb1Q91XX8 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgb1Q91XX8 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.54■□□□□ 0.56
Pcdhgb1Q91XX8 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
Pcdhgb1Q91XX8 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgb1Q91XX8 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgb1Q91XX8 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgb1Q91XX8 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Pcdhgb1Q91XX8 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgb1Q91XX8 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Pcdhgb1Q91XX8 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.54■□□□□ 0.56
Pcdhgb1Q91XX8 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.54■□□□□ 0.56
Pcdhgb1Q91XX8 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgb1Q91XX8 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.54■□□□□ 0.56
Pcdhgb1Q91XX8 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgb1Q91XX8 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgb1Q91XX8 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.54■□□□□ 0.56
Pcdhgb1Q91XX8 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Pcdhgb1Q91XX8 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgb1Q91XX8 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgb1Q91XX8 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.53■□□□□ 0.56
Pcdhgb1Q91XX8 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.53■□□□□ 0.56
Pcdhgb1Q91XX8 Gm37292-201ENSMUST00000192062 758 ntBASIC18.53■□□□□ 0.56
Pcdhgb1Q91XX8 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.53■□□□□ 0.56
Pcdhgb1Q91XX8 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.53■□□□□ 0.56
Pcdhgb1Q91XX8 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgb1Q91XX8 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgb1Q91XX8 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgb1Q91XX8 Grk6-206ENSMUST00000224995 2971 ntBASIC18.53■□□□□ 0.56
Pcdhgb1Q91XX8 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgb1Q91XX8 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgb1Q91XX8 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhgb1Q91XX8 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhgb1Q91XX8 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhgb1Q91XX8 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhgb1Q91XX8 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Pcdhgb1Q91XX8 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhgb1Q91XX8 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhgb1Q91XX8 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Pcdhgb1Q91XX8 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Pcdhgb1Q91XX8 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhgb1Q91XX8 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.52■□□□□ 0.55
Pcdhgb1Q91XX8 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdhgb1Q91XX8 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdhgb1Q91XX8 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdhgb1Q91XX8 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdhgb1Q91XX8 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdhgb1Q91XX8 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.52■□□□□ 0.55
Pcdhgb1Q91XX8 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgb1Q91XX8 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgb1Q91XX8 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgb1Q91XX8 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgb1Q91XX8 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Pcdhgb1Q91XX8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgb1Q91XX8 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Pcdhgb1Q91XX8 Gm15565-201ENSMUST00000118890 427 ntBASIC18.51■□□□□ 0.55
Pcdhgb1Q91XX8 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.51■□□□□ 0.55
Pcdhgb1Q91XX8 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.51■□□□□ 0.55
Pcdhgb1Q91XX8 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.51■□□□□ 0.55
Pcdhgb1Q91XX8 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgb1Q91XX8 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgb1Q91XX8 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.51■□□□□ 0.55
Pcdhgb1Q91XX8 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgb1Q91XX8 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhgb1Q91XX8 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgb1Q91XX8 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgb1Q91XX8 Mir5122-201ENSMUST00000175004 89 ntBASIC18.5■□□□□ 0.55
Pcdhgb1Q91XX8 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Pcdhgb1Q91XX8 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.5■□□□□ 0.55
Pcdhgb1Q91XX8 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.5■□□□□ 0.55
Pcdhgb1Q91XX8 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgb1Q91XX8 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgb1Q91XX8 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgb1Q91XX8 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgb1Q91XX8 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms