Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.67■□□□□ 0.42
Vsx1Q91V10 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Vsx1Q91V10 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vsx1Q91V10 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vsx1Q91V10 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vsx1Q91V10 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vsx1Q91V10 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Vsx1Q91V10 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Vsx1Q91V10 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vsx1Q91V10 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.67■□□□□ 0.42
Vsx1Q91V10 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vsx1Q91V10 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vsx1Q91V10 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vsx1Q91V10 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vsx1Q91V10 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vsx1Q91V10 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vsx1Q91V10 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Vsx1Q91V10 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vsx1Q91V10 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vsx1Q91V10 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vsx1Q91V10 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Vsx1Q91V10 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vsx1Q91V10 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.66■□□□□ 0.42
Vsx1Q91V10 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vsx1Q91V10 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vsx1Q91V10 Gm17971-201ENSMUST00000190239 806 ntBASIC17.66■□□□□ 0.42
Vsx1Q91V10 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.66■□□□□ 0.42
Vsx1Q91V10 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vsx1Q91V10 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vsx1Q91V10 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vsx1Q91V10 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vsx1Q91V10 Gm7461-201ENSMUST00000058918 827 ntBASIC17.66■□□□□ 0.42
Vsx1Q91V10 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.66■□□□□ 0.42
Vsx1Q91V10 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Vsx1Q91V10 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vsx1Q91V10 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vsx1Q91V10 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vsx1Q91V10 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vsx1Q91V10 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vsx1Q91V10 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Vsx1Q91V10 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.65■□□□□ 0.42
Vsx1Q91V10 Gm38285-201ENSMUST00000192928 922 ntBASIC17.65■□□□□ 0.42
Vsx1Q91V10 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vsx1Q91V10 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.65■□□□□ 0.42
Vsx1Q91V10 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vsx1Q91V10 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Vsx1Q91V10 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vsx1Q91V10 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vsx1Q91V10 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vsx1Q91V10 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.65■□□□□ 0.42
Vsx1Q91V10 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Vsx1Q91V10 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Vsx1Q91V10 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Vsx1Q91V10 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Vsx1Q91V10 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Vsx1Q91V10 BC021767-201ENSMUST00000126387 1716 ntBASIC17.64■□□□□ 0.41
Vsx1Q91V10 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Vsx1Q91V10 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Vsx1Q91V10 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.64■□□□□ 0.41
Vsx1Q91V10 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
Vsx1Q91V10 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vsx1Q91V10 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vsx1Q91V10 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.64■□□□□ 0.41
Vsx1Q91V10 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Vsx1Q91V10 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vsx1Q91V10 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.64■□□□□ 0.41
Vsx1Q91V10 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.64■□□□□ 0.41
Vsx1Q91V10 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.64■□□□□ 0.41
Vsx1Q91V10 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vsx1Q91V10 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vsx1Q91V10 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vsx1Q91V10 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Vsx1Q91V10 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vsx1Q91V10 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.64■□□□□ 0.41
Vsx1Q91V10 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Vsx1Q91V10 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Vsx1Q91V10 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vsx1Q91V10 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.63■□□□□ 0.41
Vsx1Q91V10 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Vsx1Q91V10 Gm7284-201ENSMUST00000131667 944 ntBASIC17.63■□□□□ 0.41
Vsx1Q91V10 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vsx1Q91V10 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Vsx1Q91V10 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vsx1Q91V10 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vsx1Q91V10 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.63■□□□□ 0.41
Vsx1Q91V10 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Vsx1Q91V10 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Vsx1Q91V10 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vsx1Q91V10 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Vsx1Q91V10 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vsx1Q91V10 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.62■□□□□ 0.41
Vsx1Q91V10 Mir5130-201ENSMUST00000175160 84 ntBASIC17.62■□□□□ 0.41
Vsx1Q91V10 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vsx1Q91V10 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.62■□□□□ 0.41
Vsx1Q91V10 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vsx1Q91V10 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vsx1Q91V10 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Vsx1Q91V10 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vsx1Q91V10 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vsx1Q91V10 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms