Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb11Q91UZ8 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb11Q91UZ8 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.34■□□□□ 0.53
Pcdhb11Q91UZ8 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb11Q91UZ8 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb11Q91UZ8 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Pcdhb11Q91UZ8 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhb11Q91UZ8 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhb11Q91UZ8 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhb11Q91UZ8 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhb11Q91UZ8 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.33■□□□□ 0.53
Pcdhb11Q91UZ8 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Pcdhb11Q91UZ8 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.33■□□□□ 0.53
Pcdhb11Q91UZ8 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb11Q91UZ8 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb11Q91UZ8 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb11Q91UZ8 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb11Q91UZ8 Mtag2-201ENSMUST00000058665 714 ntBASIC18.33■□□□□ 0.52
Pcdhb11Q91UZ8 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb11Q91UZ8 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Pcdhb11Q91UZ8 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb11Q91UZ8 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb11Q91UZ8 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb11Q91UZ8 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb11Q91UZ8 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Pcdhb11Q91UZ8 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb11Q91UZ8 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb11Q91UZ8 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb11Q91UZ8 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Pcdhb11Q91UZ8 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb11Q91UZ8 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb11Q91UZ8 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb11Q91UZ8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb11Q91UZ8 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb11Q91UZ8 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb11Q91UZ8 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb11Q91UZ8 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb11Q91UZ8 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.32■□□□□ 0.52
Pcdhb11Q91UZ8 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.32■□□□□ 0.52
Pcdhb11Q91UZ8 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb11Q91UZ8 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb11Q91UZ8 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb11Q91UZ8 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb11Q91UZ8 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb11Q91UZ8 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb11Q91UZ8 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb11Q91UZ8 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb11Q91UZ8 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb11Q91UZ8 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb11Q91UZ8 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Pcdhb11Q91UZ8 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.31■□□□□ 0.52
Pcdhb11Q91UZ8 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Pcdhb11Q91UZ8 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb11Q91UZ8 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb11Q91UZ8 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb11Q91UZ8 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb11Q91UZ8 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb11Q91UZ8 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.31■□□□□ 0.52
Pcdhb11Q91UZ8 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.3■□□□□ 0.52
Pcdhb11Q91UZ8 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.3■□□□□ 0.52
Pcdhb11Q91UZ8 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb11Q91UZ8 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Pcdhb11Q91UZ8 Gm10653-202ENSMUST00000139570 835 ntBASIC18.3■□□□□ 0.52
Pcdhb11Q91UZ8 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.3■□□□□ 0.52
Pcdhb11Q91UZ8 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb11Q91UZ8 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb11Q91UZ8 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb11Q91UZ8 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb11Q91UZ8 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb11Q91UZ8 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Pcdhb11Q91UZ8 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb11Q91UZ8 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.3■□□□□ 0.52
Pcdhb11Q91UZ8 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb11Q91UZ8 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb11Q91UZ8 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb11Q91UZ8 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Pcdhb11Q91UZ8 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
Pcdhb11Q91UZ8 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb11Q91UZ8 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb11Q91UZ8 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb11Q91UZ8 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.29■□□□□ 0.52
Pcdhb11Q91UZ8 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.29■□□□□ 0.52
Pcdhb11Q91UZ8 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.29■□□□□ 0.52
Pcdhb11Q91UZ8 Trmt13-210ENSMUST00000198454 880 ntBASIC18.29■□□□□ 0.52
Pcdhb11Q91UZ8 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.29■□□□□ 0.52
Pcdhb11Q91UZ8 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb11Q91UZ8 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb11Q91UZ8 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb11Q91UZ8 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.29■□□□□ 0.52
Pcdhb11Q91UZ8 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.29■□□□□ 0.52
Pcdhb11Q91UZ8 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb11Q91UZ8 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb11Q91UZ8 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb11Q91UZ8 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Pcdhb11Q91UZ8 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb11Q91UZ8 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb11Q91UZ8 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb11Q91UZ8 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb11Q91UZ8 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Pcdhb11Q91UZ8 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms