Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
StrcQ8VIM6 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
StrcQ8VIM6 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
StrcQ8VIM6 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC21.52■■□□□ 1.04
StrcQ8VIM6 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
StrcQ8VIM6 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
StrcQ8VIM6 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
StrcQ8VIM6 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
StrcQ8VIM6 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
StrcQ8VIM6 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
StrcQ8VIM6 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
StrcQ8VIM6 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
StrcQ8VIM6 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
StrcQ8VIM6 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.51■■□□□ 1.03
StrcQ8VIM6 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
StrcQ8VIM6 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
StrcQ8VIM6 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
StrcQ8VIM6 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
StrcQ8VIM6 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC21.51■■□□□ 1.03
StrcQ8VIM6 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
StrcQ8VIM6 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
StrcQ8VIM6 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
StrcQ8VIM6 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC21.5■■□□□ 1.03
StrcQ8VIM6 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
StrcQ8VIM6 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
StrcQ8VIM6 AC121961.1-201ENSMUST00000218594 1779 ntBASIC21.5■■□□□ 1.03
StrcQ8VIM6 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
StrcQ8VIM6 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
StrcQ8VIM6 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
StrcQ8VIM6 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
StrcQ8VIM6 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
StrcQ8VIM6 Actl10-202ENSMUST00000226583 1501 ntBASIC21.5■■□□□ 1.03
StrcQ8VIM6 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
StrcQ8VIM6 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC21.5■■□□□ 1.03
StrcQ8VIM6 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
StrcQ8VIM6 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
StrcQ8VIM6 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
StrcQ8VIM6 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
StrcQ8VIM6 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
StrcQ8VIM6 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
StrcQ8VIM6 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
StrcQ8VIM6 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
StrcQ8VIM6 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
StrcQ8VIM6 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
StrcQ8VIM6 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
StrcQ8VIM6 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC21.48■■□□□ 1.03
StrcQ8VIM6 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC21.48■■□□□ 1.03
StrcQ8VIM6 Gm27742-201ENSMUST00000184667 60 ntBASIC21.48■■□□□ 1.03
StrcQ8VIM6 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
StrcQ8VIM6 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
StrcQ8VIM6 Olfr129-201ENSMUST00000122318 993 ntBASIC21.48■■□□□ 1.03
StrcQ8VIM6 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
StrcQ8VIM6 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
StrcQ8VIM6 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
StrcQ8VIM6 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
StrcQ8VIM6 Gm45906-201ENSMUST00000208911 1430 ntBASIC21.47■■□□□ 1.03
StrcQ8VIM6 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC21.47■■□□□ 1.03
StrcQ8VIM6 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
StrcQ8VIM6 Gm29791-202ENSMUST00000207888 369 ntBASIC21.47■■□□□ 1.03
StrcQ8VIM6 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
StrcQ8VIM6 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
StrcQ8VIM6 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC21.46■■□□□ 1.03
StrcQ8VIM6 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
StrcQ8VIM6 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
StrcQ8VIM6 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC21.46■■□□□ 1.03
StrcQ8VIM6 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
StrcQ8VIM6 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC21.46■■□□□ 1.03
StrcQ8VIM6 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.03
StrcQ8VIM6 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC21.45■■□□□ 1.03
StrcQ8VIM6 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC21.45■■□□□ 1.03
StrcQ8VIM6 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC21.45■■□□□ 1.03
StrcQ8VIM6 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC21.45■■□□□ 1.03
StrcQ8VIM6 Gm5867-201ENSMUST00000063197 592 ntBASIC21.45■■□□□ 1.03
StrcQ8VIM6 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC21.45■■□□□ 1.02
StrcQ8VIM6 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
StrcQ8VIM6 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
StrcQ8VIM6 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
StrcQ8VIM6 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
StrcQ8VIM6 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
StrcQ8VIM6 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
StrcQ8VIM6 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
StrcQ8VIM6 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC21.45■■□□□ 1.02
StrcQ8VIM6 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC21.45■■□□□ 1.02
StrcQ8VIM6 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
StrcQ8VIM6 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
StrcQ8VIM6 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
StrcQ8VIM6 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
StrcQ8VIM6 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC21.44■■□□□ 1.02
StrcQ8VIM6 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
StrcQ8VIM6 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
StrcQ8VIM6 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
StrcQ8VIM6 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
StrcQ8VIM6 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
StrcQ8VIM6 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
StrcQ8VIM6 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
StrcQ8VIM6 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
StrcQ8VIM6 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
StrcQ8VIM6 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
StrcQ8VIM6 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
StrcQ8VIM6 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms