Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TraipQ8VIG6 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TraipQ8VIG6 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TraipQ8VIG6 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TraipQ8VIG6 Iqck-206ENSMUST00000208658 2891 ntBASIC19.03■□□□□ 0.64
TraipQ8VIG6 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TraipQ8VIG6 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TraipQ8VIG6 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
TraipQ8VIG6 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
TraipQ8VIG6 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.02■□□□□ 0.64
TraipQ8VIG6 Gm11539-201ENSMUST00000119837 557 ntBASIC19.02■□□□□ 0.64
TraipQ8VIG6 Gm13436-201ENSMUST00000120418 567 ntBASIC19.02■□□□□ 0.64
TraipQ8VIG6 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TraipQ8VIG6 Gm10231-201ENSMUST00000181584 441 ntBASIC19.02■□□□□ 0.64
TraipQ8VIG6 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TraipQ8VIG6 Gm10175-202ENSMUST00000208752 441 ntBASIC19.02■□□□□ 0.64
TraipQ8VIG6 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.02■□□□□ 0.64
TraipQ8VIG6 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
TraipQ8VIG6 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TraipQ8VIG6 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
TraipQ8VIG6 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
TraipQ8VIG6 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TraipQ8VIG6 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.01■□□□□ 0.63
TraipQ8VIG6 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TraipQ8VIG6 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TraipQ8VIG6 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.01■□□□□ 0.63
TraipQ8VIG6 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TraipQ8VIG6 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TraipQ8VIG6 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.01■□□□□ 0.63
TraipQ8VIG6 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.01■□□□□ 0.63
TraipQ8VIG6 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.01■□□□□ 0.63
TraipQ8VIG6 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TraipQ8VIG6 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TraipQ8VIG6 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TraipQ8VIG6 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TraipQ8VIG6 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TraipQ8VIG6 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TraipQ8VIG6 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19■□□□□ 0.63
TraipQ8VIG6 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TraipQ8VIG6 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TraipQ8VIG6 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
TraipQ8VIG6 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19■□□□□ 0.63
TraipQ8VIG6 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TraipQ8VIG6 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19■□□□□ 0.63
TraipQ8VIG6 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TraipQ8VIG6 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
TraipQ8VIG6 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TraipQ8VIG6 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TraipQ8VIG6 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TraipQ8VIG6 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TraipQ8VIG6 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TraipQ8VIG6 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TraipQ8VIG6 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TraipQ8VIG6 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TraipQ8VIG6 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
TraipQ8VIG6 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.99■□□□□ 0.63
TraipQ8VIG6 Gm27463-201ENSMUST00000183569 57 ntBASIC18.99■□□□□ 0.63
TraipQ8VIG6 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TraipQ8VIG6 Gm29791-202ENSMUST00000207888 369 ntBASIC18.99■□□□□ 0.63
TraipQ8VIG6 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TraipQ8VIG6 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
TraipQ8VIG6 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TraipQ8VIG6 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TraipQ8VIG6 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TraipQ8VIG6 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TraipQ8VIG6 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TraipQ8VIG6 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TraipQ8VIG6 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TraipQ8VIG6 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TraipQ8VIG6 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TraipQ8VIG6 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TraipQ8VIG6 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.98■□□□□ 0.63
TraipQ8VIG6 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TraipQ8VIG6 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TraipQ8VIG6 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
TraipQ8VIG6 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TraipQ8VIG6 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TraipQ8VIG6 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TraipQ8VIG6 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TraipQ8VIG6 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
TraipQ8VIG6 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TraipQ8VIG6 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.98■□□□□ 0.63
TraipQ8VIG6 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TraipQ8VIG6 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TraipQ8VIG6 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.97■□□□□ 0.63
TraipQ8VIG6 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TraipQ8VIG6 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TraipQ8VIG6 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TraipQ8VIG6 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TraipQ8VIG6 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TraipQ8VIG6 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.97■□□□□ 0.63
TraipQ8VIG6 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TraipQ8VIG6 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TraipQ8VIG6 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TraipQ8VIG6 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TraipQ8VIG6 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TraipQ8VIG6 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TraipQ8VIG6 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
TraipQ8VIG6 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
TraipQ8VIG6 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms