Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.51■□□□□ 0.55
Trim60Q8VI40 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.51■□□□□ 0.55
Trim60Q8VI40 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim60Q8VI40 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim60Q8VI40 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Trim60Q8VI40 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim60Q8VI40 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim60Q8VI40 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim60Q8VI40 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim60Q8VI40 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Trim60Q8VI40 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trim60Q8VI40 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim60Q8VI40 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
Trim60Q8VI40 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.5■□□□□ 0.55
Trim60Q8VI40 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim60Q8VI40 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.5■□□□□ 0.55
Trim60Q8VI40 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trim60Q8VI40 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim60Q8VI40 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim60Q8VI40 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.49■□□□□ 0.55
Trim60Q8VI40 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim60Q8VI40 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trim60Q8VI40 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trim60Q8VI40 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Trim60Q8VI40 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.49■□□□□ 0.55
Trim60Q8VI40 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim60Q8VI40 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Trim60Q8VI40 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trim60Q8VI40 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.49■□□□□ 0.55
Trim60Q8VI40 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trim60Q8VI40 Gm7514-201ENSMUST00000209475 934 ntBASIC18.49■□□□□ 0.55
Trim60Q8VI40 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim60Q8VI40 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trim60Q8VI40 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Trim60Q8VI40 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim60Q8VI40 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim60Q8VI40 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.49■□□□□ 0.55
Trim60Q8VI40 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Trim60Q8VI40 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Trim60Q8VI40 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim60Q8VI40 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim60Q8VI40 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Trim60Q8VI40 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Trim60Q8VI40 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Trim60Q8VI40 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trim60Q8VI40 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trim60Q8VI40 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.48■□□□□ 0.55
Trim60Q8VI40 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.47■□□□□ 0.55
Trim60Q8VI40 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim60Q8VI40 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Trim60Q8VI40 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim60Q8VI40 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Trim60Q8VI40 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim60Q8VI40 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Trim60Q8VI40 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Trim60Q8VI40 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim60Q8VI40 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Trim60Q8VI40 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trim60Q8VI40 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.46■□□□□ 0.55
Trim60Q8VI40 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim60Q8VI40 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim60Q8VI40 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim60Q8VI40 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim60Q8VI40 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim60Q8VI40 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim60Q8VI40 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim60Q8VI40 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim60Q8VI40 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim60Q8VI40 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim60Q8VI40 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim60Q8VI40 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trim60Q8VI40 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trim60Q8VI40 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim60Q8VI40 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim60Q8VI40 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.45■□□□□ 0.54
Trim60Q8VI40 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim60Q8VI40 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim60Q8VI40 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim60Q8VI40 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim60Q8VI40 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.45■□□□□ 0.54
Trim60Q8VI40 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Trim60Q8VI40 Gm18671-201ENSMUST00000214826 683 ntBASIC18.45■□□□□ 0.54
Trim60Q8VI40 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim60Q8VI40 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim60Q8VI40 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim60Q8VI40 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim60Q8VI40 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim60Q8VI40 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim60Q8VI40 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Trim60Q8VI40 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Trim60Q8VI40 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim60Q8VI40 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.44■□□□□ 0.54
Trim60Q8VI40 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim60Q8VI40 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trim60Q8VI40 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim60Q8VI40 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim60Q8VI40 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim60Q8VI40 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trim60Q8VI40 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim60Q8VI40 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms