Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Pcdh18Q8VHR0 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh18Q8VHR0 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.23■□□□□ 0.35
Pcdh18Q8VHR0 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh18Q8VHR0 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Pcdh18Q8VHR0 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh18Q8VHR0 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh18Q8VHR0 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh18Q8VHR0 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh18Q8VHR0 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.23■□□□□ 0.35
Pcdh18Q8VHR0 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh18Q8VHR0 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Pcdh18Q8VHR0 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh18Q8VHR0 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.22■□□□□ 0.35
Pcdh18Q8VHR0 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh18Q8VHR0 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh18Q8VHR0 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh18Q8VHR0 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Pcdh18Q8VHR0 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.22■□□□□ 0.35
Pcdh18Q8VHR0 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh18Q8VHR0 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.22■□□□□ 0.35
Pcdh18Q8VHR0 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.22■□□□□ 0.35
Pcdh18Q8VHR0 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.22■□□□□ 0.35
Pcdh18Q8VHR0 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.22■□□□□ 0.35
Pcdh18Q8VHR0 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.22■□□□□ 0.35
Pcdh18Q8VHR0 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.22■□□□□ 0.35
Pcdh18Q8VHR0 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh18Q8VHR0 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh18Q8VHR0 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh18Q8VHR0 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Pcdh18Q8VHR0 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh18Q8VHR0 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Pcdh18Q8VHR0 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh18Q8VHR0 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh18Q8VHR0 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh18Q8VHR0 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh18Q8VHR0 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh18Q8VHR0 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh18Q8VHR0 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh18Q8VHR0 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh18Q8VHR0 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh18Q8VHR0 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh18Q8VHR0 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh18Q8VHR0 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh18Q8VHR0 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh18Q8VHR0 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh18Q8VHR0 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh18Q8VHR0 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh18Q8VHR0 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh18Q8VHR0 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Pcdh18Q8VHR0 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh18Q8VHR0 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh18Q8VHR0 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh18Q8VHR0 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pcdh18Q8VHR0 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh18Q8VHR0 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh18Q8VHR0 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.2■□□□□ 0.34
Pcdh18Q8VHR0 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh18Q8VHR0 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh18Q8VHR0 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh18Q8VHR0 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh18Q8VHR0 Gm8969-201ENSMUST00000199694 526 ntBASIC17.2■□□□□ 0.34
Pcdh18Q8VHR0 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh18Q8VHR0 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh18Q8VHR0 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh18Q8VHR0 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh18Q8VHR0 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Pcdh18Q8VHR0 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh18Q8VHR0 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.2■□□□□ 0.34
Pcdh18Q8VHR0 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh18Q8VHR0 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh18Q8VHR0 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh18Q8VHR0 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh18Q8VHR0 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh18Q8VHR0 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh18Q8VHR0 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh18Q8VHR0 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh18Q8VHR0 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh18Q8VHR0 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh18Q8VHR0 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh18Q8VHR0 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh18Q8VHR0 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh18Q8VHR0 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh18Q8VHR0 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.19■□□□□ 0.34
Pcdh18Q8VHR0 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh18Q8VHR0 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh18Q8VHR0 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh18Q8VHR0 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh18Q8VHR0 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh18Q8VHR0 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh18Q8VHR0 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh18Q8VHR0 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh18Q8VHR0 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh18Q8VHR0 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh18Q8VHR0 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh18Q8VHR0 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh18Q8VHR0 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh18Q8VHR0 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh18Q8VHR0 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh18Q8VHR0 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms