Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.01■□□□□ 0.47
Rpa1Q8VEE4 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.01■□□□□ 0.47
Rpa1Q8VEE4 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rpa1Q8VEE4 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rpa1Q8VEE4 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.01■□□□□ 0.47
Rpa1Q8VEE4 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rpa1Q8VEE4 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.01■□□□□ 0.47
Rpa1Q8VEE4 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rpa1Q8VEE4 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rpa1Q8VEE4 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.01■□□□□ 0.47
Rpa1Q8VEE4 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rpa1Q8VEE4 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Rpa1Q8VEE4 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rpa1Q8VEE4 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rpa1Q8VEE4 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rpa1Q8VEE4 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rpa1Q8VEE4 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18■□□□□ 0.47
Rpa1Q8VEE4 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rpa1Q8VEE4 Appbp2os-202ENSMUST00000206972 447 ntBASIC18■□□□□ 0.47
Rpa1Q8VEE4 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rpa1Q8VEE4 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Rpa1Q8VEE4 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rpa1Q8VEE4 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rpa1Q8VEE4 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rpa1Q8VEE4 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rpa1Q8VEE4 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rpa1Q8VEE4 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rpa1Q8VEE4 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rpa1Q8VEE4 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.99■□□□□ 0.47
Rpa1Q8VEE4 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rpa1Q8VEE4 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Rpa1Q8VEE4 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rpa1Q8VEE4 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rpa1Q8VEE4 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rpa1Q8VEE4 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.99■□□□□ 0.47
Rpa1Q8VEE4 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rpa1Q8VEE4 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rpa1Q8VEE4 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rpa1Q8VEE4 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rpa1Q8VEE4 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.99■□□□□ 0.47
Rpa1Q8VEE4 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rpa1Q8VEE4 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rpa1Q8VEE4 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rpa1Q8VEE4 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.98■□□□□ 0.47
Rpa1Q8VEE4 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rpa1Q8VEE4 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.98■□□□□ 0.47
Rpa1Q8VEE4 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rpa1Q8VEE4 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rpa1Q8VEE4 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Rpa1Q8VEE4 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rpa1Q8VEE4 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rpa1Q8VEE4 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
Rpa1Q8VEE4 Gm38205-201ENSMUST00000192243 258 ntBASIC17.98■□□□□ 0.47
Rpa1Q8VEE4 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rpa1Q8VEE4 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rpa1Q8VEE4 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rpa1Q8VEE4 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Rpa1Q8VEE4 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rpa1Q8VEE4 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rpa1Q8VEE4 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rpa1Q8VEE4 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rpa1Q8VEE4 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rpa1Q8VEE4 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rpa1Q8VEE4 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rpa1Q8VEE4 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rpa1Q8VEE4 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rpa1Q8VEE4 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.97■□□□□ 0.47
Rpa1Q8VEE4 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Rpa1Q8VEE4 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rpa1Q8VEE4 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rpa1Q8VEE4 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.97■□□□□ 0.47
Rpa1Q8VEE4 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rpa1Q8VEE4 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rpa1Q8VEE4 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Rpa1Q8VEE4 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rpa1Q8VEE4 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rpa1Q8VEE4 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rpa1Q8VEE4 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rpa1Q8VEE4 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
Rpa1Q8VEE4 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rpa1Q8VEE4 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Rpa1Q8VEE4 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rpa1Q8VEE4 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.96■□□□□ 0.47
Rpa1Q8VEE4 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rpa1Q8VEE4 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Rpa1Q8VEE4 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rpa1Q8VEE4 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rpa1Q8VEE4 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rpa1Q8VEE4 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Rpa1Q8VEE4 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.96■□□□□ 0.47
Rpa1Q8VEE4 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Rpa1Q8VEE4 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rpa1Q8VEE4 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rpa1Q8VEE4 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.96■□□□□ 0.47
Rpa1Q8VEE4 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.96■□□□□ 0.47
Rpa1Q8VEE4 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rpa1Q8VEE4 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rpa1Q8VEE4 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.95■□□□□ 0.46
Rpa1Q8VEE4 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.95■□□□□ 0.46
Rpa1Q8VEE4 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms