Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lmcd1Q8VEE1 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.05■□□□□ 0.64
Lmcd1Q8VEE1 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Lmcd1Q8VEE1 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.05■□□□□ 0.64
Lmcd1Q8VEE1 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC19.05■□□□□ 0.64
Lmcd1Q8VEE1 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC19.05■□□□□ 0.64
Lmcd1Q8VEE1 Gm27742-201ENSMUST00000184667 60 ntBASIC19.05■□□□□ 0.64
Lmcd1Q8VEE1 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.05■□□□□ 0.64
Lmcd1Q8VEE1 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lmcd1Q8VEE1 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lmcd1Q8VEE1 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Lmcd1Q8VEE1 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lmcd1Q8VEE1 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lmcd1Q8VEE1 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lmcd1Q8VEE1 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Lmcd1Q8VEE1 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lmcd1Q8VEE1 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Lmcd1Q8VEE1 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lmcd1Q8VEE1 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.05■□□□□ 0.64
Lmcd1Q8VEE1 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lmcd1Q8VEE1 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lmcd1Q8VEE1 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Lmcd1Q8VEE1 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lmcd1Q8VEE1 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Lmcd1Q8VEE1 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC19.04■□□□□ 0.64
Lmcd1Q8VEE1 AW822252-206ENSMUST00000208904 237 ntBASIC19.04■□□□□ 0.64
Lmcd1Q8VEE1 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lmcd1Q8VEE1 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lmcd1Q8VEE1 Birc2-201ENSMUST00000054878 378 ntBASIC19.04■□□□□ 0.64
Lmcd1Q8VEE1 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lmcd1Q8VEE1 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lmcd1Q8VEE1 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Lmcd1Q8VEE1 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Lmcd1Q8VEE1 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Lmcd1Q8VEE1 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lmcd1Q8VEE1 Gm7638-201ENSMUST00000121348 967 ntBASIC19.03■□□□□ 0.64
Lmcd1Q8VEE1 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC19.03■□□□□ 0.64
Lmcd1Q8VEE1 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Lmcd1Q8VEE1 Gm34391-201ENSMUST00000203706 907 ntBASIC19.03■□□□□ 0.64
Lmcd1Q8VEE1 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Lmcd1Q8VEE1 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lmcd1Q8VEE1 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Lmcd1Q8VEE1 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
Lmcd1Q8VEE1 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lmcd1Q8VEE1 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Lmcd1Q8VEE1 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lmcd1Q8VEE1 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Lmcd1Q8VEE1 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lmcd1Q8VEE1 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Lmcd1Q8VEE1 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lmcd1Q8VEE1 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lmcd1Q8VEE1 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Lmcd1Q8VEE1 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lmcd1Q8VEE1 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.02■□□□□ 0.64
Lmcd1Q8VEE1 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC19.02■□□□□ 0.64
Lmcd1Q8VEE1 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Lmcd1Q8VEE1 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Lmcd1Q8VEE1 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lmcd1Q8VEE1 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Lmcd1Q8VEE1 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Lmcd1Q8VEE1 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Lmcd1Q8VEE1 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Lmcd1Q8VEE1 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lmcd1Q8VEE1 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Lmcd1Q8VEE1 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Lmcd1Q8VEE1 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC19.01■□□□□ 0.63
Lmcd1Q8VEE1 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.01■□□□□ 0.63
Lmcd1Q8VEE1 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Lmcd1Q8VEE1 Gm7213-201ENSMUST00000215977 950 ntBASIC19.01■□□□□ 0.63
Lmcd1Q8VEE1 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lmcd1Q8VEE1 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lmcd1Q8VEE1 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.01■□□□□ 0.63
Lmcd1Q8VEE1 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.01■□□□□ 0.63
Lmcd1Q8VEE1 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lmcd1Q8VEE1 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Lmcd1Q8VEE1 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Lmcd1Q8VEE1 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lmcd1Q8VEE1 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lmcd1Q8VEE1 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lmcd1Q8VEE1 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lmcd1Q8VEE1 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19■□□□□ 0.63
Lmcd1Q8VEE1 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19■□□□□ 0.63
Lmcd1Q8VEE1 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lmcd1Q8VEE1 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19■□□□□ 0.63
Lmcd1Q8VEE1 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lmcd1Q8VEE1 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC19■□□□□ 0.63
Lmcd1Q8VEE1 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Lmcd1Q8VEE1 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lmcd1Q8VEE1 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lmcd1Q8VEE1 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lmcd1Q8VEE1 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lmcd1Q8VEE1 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.99■□□□□ 0.63
Lmcd1Q8VEE1 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lmcd1Q8VEE1 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
Lmcd1Q8VEE1 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC18.99■□□□□ 0.63
Lmcd1Q8VEE1 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.99■□□□□ 0.63
Lmcd1Q8VEE1 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Lmcd1Q8VEE1 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lmcd1Q8VEE1 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Lmcd1Q8VEE1 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms