Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Vps39Q8R5L3 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps39Q8R5L3 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps39Q8R5L3 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps39Q8R5L3 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps39Q8R5L3 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Vps39Q8R5L3 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Vps39Q8R5L3 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Vps39Q8R5L3 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.92■□□□□ 0.46
Vps39Q8R5L3 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Vps39Q8R5L3 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps39Q8R5L3 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Vps39Q8R5L3 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
Vps39Q8R5L3 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps39Q8R5L3 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps39Q8R5L3 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps39Q8R5L3 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Vps39Q8R5L3 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps39Q8R5L3 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps39Q8R5L3 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps39Q8R5L3 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Vps39Q8R5L3 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Vps39Q8R5L3 Gm15039-201ENSMUST00000118914 875 ntBASIC17.91■□□□□ 0.46
Vps39Q8R5L3 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.91■□□□□ 0.46
Vps39Q8R5L3 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps39Q8R5L3 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Vps39Q8R5L3 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps39Q8R5L3 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps39Q8R5L3 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps39Q8R5L3 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps39Q8R5L3 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps39Q8R5L3 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Vps39Q8R5L3 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps39Q8R5L3 Gm7290-201ENSMUST00000104990 617 ntBASIC17.9■□□□□ 0.46
Vps39Q8R5L3 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.9■□□□□ 0.46
Vps39Q8R5L3 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Vps39Q8R5L3 Gm12918-201ENSMUST00000120234 636 ntBASIC17.9■□□□□ 0.46
Vps39Q8R5L3 Gm15710-201ENSMUST00000121821 636 ntBASIC17.9■□□□□ 0.46
Vps39Q8R5L3 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.9■□□□□ 0.46
Vps39Q8R5L3 Gm5075-201ENSMUST00000196916 622 ntBASIC17.9■□□□□ 0.46
Vps39Q8R5L3 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps39Q8R5L3 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.9■□□□□ 0.46
Vps39Q8R5L3 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.9■□□□□ 0.46
Vps39Q8R5L3 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Vps39Q8R5L3 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.9■□□□□ 0.46
Vps39Q8R5L3 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps39Q8R5L3 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps39Q8R5L3 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Vps39Q8R5L3 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
Vps39Q8R5L3 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Vps39Q8R5L3 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps39Q8R5L3 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps39Q8R5L3 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps39Q8R5L3 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps39Q8R5L3 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps39Q8R5L3 Gm10849-201ENSMUST00000100397 618 ntBASIC17.89■□□□□ 0.45
Vps39Q8R5L3 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Vps39Q8R5L3 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Vps39Q8R5L3 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps39Q8R5L3 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps39Q8R5L3 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps39Q8R5L3 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps39Q8R5L3 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps39Q8R5L3 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Vps39Q8R5L3 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Vps39Q8R5L3 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vps39Q8R5L3 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Vps39Q8R5L3 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Vps39Q8R5L3 Gm42569-201ENSMUST00000200539 472 ntBASIC17.88■□□□□ 0.45
Vps39Q8R5L3 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Vps39Q8R5L3 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Vps39Q8R5L3 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Vps39Q8R5L3 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vps39Q8R5L3 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vps39Q8R5L3 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Vps39Q8R5L3 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Vps39Q8R5L3 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Vps39Q8R5L3 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vps39Q8R5L3 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vps39Q8R5L3 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Vps39Q8R5L3 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Vps39Q8R5L3 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps39Q8R5L3 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps39Q8R5L3 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Vps39Q8R5L3 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Vps39Q8R5L3 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.87■□□□□ 0.45
Vps39Q8R5L3 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Vps39Q8R5L3 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Vps39Q8R5L3 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps39Q8R5L3 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps39Q8R5L3 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Vps39Q8R5L3 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps39Q8R5L3 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Vps39Q8R5L3 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps39Q8R5L3 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps39Q8R5L3 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps39Q8R5L3 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps39Q8R5L3 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
Vps39Q8R5L3 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Vps39Q8R5L3 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms