Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3kbp1Q8R550 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3kbp1Q8R550 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3kbp1Q8R550 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3kbp1Q8R550 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.42■□□□□ 0.54
Sh3kbp1Q8R550 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3kbp1Q8R550 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3kbp1Q8R550 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.42■□□□□ 0.54
Sh3kbp1Q8R550 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
Sh3kbp1Q8R550 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Sh3kbp1Q8R550 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Sh3kbp1Q8R550 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3kbp1Q8R550 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.41■□□□□ 0.54
Sh3kbp1Q8R550 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3kbp1Q8R550 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.41■□□□□ 0.54
Sh3kbp1Q8R550 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3kbp1Q8R550 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3kbp1Q8R550 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3kbp1Q8R550 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3kbp1Q8R550 Gm22325-201ENSMUST00000158904 308 ntBASIC18.41■□□□□ 0.54
Sh3kbp1Q8R550 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.41■□□□□ 0.54
Sh3kbp1Q8R550 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3kbp1Q8R550 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Sh3kbp1Q8R550 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Sh3kbp1Q8R550 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3kbp1Q8R550 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3kbp1Q8R550 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3kbp1Q8R550 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3kbp1Q8R550 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Sh3kbp1Q8R550 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3kbp1Q8R550 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3kbp1Q8R550 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3kbp1Q8R550 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3kbp1Q8R550 Gm715-201ENSMUST00000117865 831 ntBASIC18.4■□□□□ 0.54
Sh3kbp1Q8R550 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.4■□□□□ 0.54
Sh3kbp1Q8R550 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3kbp1Q8R550 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3kbp1Q8R550 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3kbp1Q8R550 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Sh3kbp1Q8R550 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.4■□□□□ 0.54
Sh3kbp1Q8R550 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Sh3kbp1Q8R550 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Sh3kbp1Q8R550 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh3kbp1Q8R550 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh3kbp1Q8R550 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.39■□□□□ 0.53
Sh3kbp1Q8R550 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Sh3kbp1Q8R550 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh3kbp1Q8R550 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.39■□□□□ 0.53
Sh3kbp1Q8R550 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.39■□□□□ 0.53
Sh3kbp1Q8R550 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh3kbp1Q8R550 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.39■□□□□ 0.53
Sh3kbp1Q8R550 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.39■□□□□ 0.53
Sh3kbp1Q8R550 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh3kbp1Q8R550 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh3kbp1Q8R550 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Sh3kbp1Q8R550 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh3kbp1Q8R550 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3kbp1Q8R550 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3kbp1Q8R550 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3kbp1Q8R550 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3kbp1Q8R550 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3kbp1Q8R550 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3kbp1Q8R550 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3kbp1Q8R550 Gm13158-201ENSMUST00000122007 736 ntBASIC18.38■□□□□ 0.53
Sh3kbp1Q8R550 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.38■□□□□ 0.53
Sh3kbp1Q8R550 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.38■□□□□ 0.53
Sh3kbp1Q8R550 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3kbp1Q8R550 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3kbp1Q8R550 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3kbp1Q8R550 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Sh3kbp1Q8R550 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.38■□□□□ 0.53
Sh3kbp1Q8R550 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3kbp1Q8R550 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
Sh3kbp1Q8R550 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh3kbp1Q8R550 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh3kbp1Q8R550 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh3kbp1Q8R550 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sh3kbp1Q8R550 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.37■□□□□ 0.53
Sh3kbp1Q8R550 Gm15378-201ENSMUST00000121894 207 ntBASIC18.37■□□□□ 0.53
Sh3kbp1Q8R550 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Sh3kbp1Q8R550 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh3kbp1Q8R550 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Sh3kbp1Q8R550 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.37■□□□□ 0.53
Sh3kbp1Q8R550 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh3kbp1Q8R550 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh3kbp1Q8R550 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh3kbp1Q8R550 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sh3kbp1Q8R550 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sh3kbp1Q8R550 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sh3kbp1Q8R550 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.36■□□□□ 0.53
Sh3kbp1Q8R550 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Sh3kbp1Q8R550 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.36■□□□□ 0.53
Sh3kbp1Q8R550 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sh3kbp1Q8R550 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sh3kbp1Q8R550 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sh3kbp1Q8R550 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sh3kbp1Q8R550 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.36■□□□□ 0.53
Sh3kbp1Q8R550 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Sh3kbp1Q8R550 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sh3kbp1Q8R550 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms