Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Chmp7Q8R1T1 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
Chmp7Q8R1T1 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC22.9■■□□□ 1.26
Chmp7Q8R1T1 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Chmp7Q8R1T1 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Chmp7Q8R1T1 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Chmp7Q8R1T1 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC22.9■■□□□ 1.26
Chmp7Q8R1T1 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Chmp7Q8R1T1 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Chmp7Q8R1T1 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC22.9■■□□□ 1.26
Chmp7Q8R1T1 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Chmp7Q8R1T1 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Chmp7Q8R1T1 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Chmp7Q8R1T1 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Chmp7Q8R1T1 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Chmp7Q8R1T1 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
Chmp7Q8R1T1 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Chmp7Q8R1T1 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
Chmp7Q8R1T1 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Chmp7Q8R1T1 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC22.89■■□□□ 1.25
Chmp7Q8R1T1 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC22.89■■□□□ 1.25
Chmp7Q8R1T1 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Chmp7Q8R1T1 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Chmp7Q8R1T1 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
Chmp7Q8R1T1 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Chmp7Q8R1T1 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC22.88■■□□□ 1.25
Chmp7Q8R1T1 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Chmp7Q8R1T1 Gm21362-201ENSMUST00000194272 928 ntBASIC22.88■■□□□ 1.25
Chmp7Q8R1T1 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Chmp7Q8R1T1 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
Chmp7Q8R1T1 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC22.88■■□□□ 1.25
Chmp7Q8R1T1 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Chmp7Q8R1T1 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Chmp7Q8R1T1 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Chmp7Q8R1T1 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Chmp7Q8R1T1 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Chmp7Q8R1T1 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC22.87■■□□□ 1.25
Chmp7Q8R1T1 Gm2274-201ENSMUST00000184539 609 ntBASIC22.87■■□□□ 1.25
Chmp7Q8R1T1 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC22.87■■□□□ 1.25
Chmp7Q8R1T1 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC22.87■■□□□ 1.25
Chmp7Q8R1T1 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Chmp7Q8R1T1 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Chmp7Q8R1T1 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Chmp7Q8R1T1 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Chmp7Q8R1T1 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Chmp7Q8R1T1 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
Chmp7Q8R1T1 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Chmp7Q8R1T1 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Chmp7Q8R1T1 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Chmp7Q8R1T1 Gm10013-201ENSMUST00000106074 672 ntBASIC22.86■■□□□ 1.25
Chmp7Q8R1T1 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC22.86■■□□□ 1.25
Chmp7Q8R1T1 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
Chmp7Q8R1T1 Mir5130-201ENSMUST00000175160 84 ntBASIC22.86■■□□□ 1.25
Chmp7Q8R1T1 Gm18032-201ENSMUST00000222541 538 ntBASIC22.86■■□□□ 1.25
Chmp7Q8R1T1 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Chmp7Q8R1T1 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Chmp7Q8R1T1 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Chmp7Q8R1T1 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
Chmp7Q8R1T1 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
Chmp7Q8R1T1 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
Chmp7Q8R1T1 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Chmp7Q8R1T1 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Chmp7Q8R1T1 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Chmp7Q8R1T1 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
Chmp7Q8R1T1 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Chmp7Q8R1T1 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
Chmp7Q8R1T1 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC22.85■■□□□ 1.25
Chmp7Q8R1T1 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Chmp7Q8R1T1 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
Chmp7Q8R1T1 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
Chmp7Q8R1T1 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Chmp7Q8R1T1 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Chmp7Q8R1T1 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Chmp7Q8R1T1 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Chmp7Q8R1T1 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Chmp7Q8R1T1 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
Chmp7Q8R1T1 Gm10418-201ENSMUST00000100943 576 ntBASIC22.84■■□□□ 1.25
Chmp7Q8R1T1 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Chmp7Q8R1T1 Gm23634-201ENSMUST00000175071 91 ntBASIC22.84■■□□□ 1.25
Chmp7Q8R1T1 Gm7367-201ENSMUST00000057611 492 ntBASIC22.84■■□□□ 1.25
Chmp7Q8R1T1 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Chmp7Q8R1T1 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Chmp7Q8R1T1 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Chmp7Q8R1T1 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Chmp7Q8R1T1 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Chmp7Q8R1T1 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC22.83■■□□□ 1.25
Chmp7Q8R1T1 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC22.83■■□□□ 1.25
Chmp7Q8R1T1 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Chmp7Q8R1T1 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Chmp7Q8R1T1 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Chmp7Q8R1T1 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Chmp7Q8R1T1 Gm37820-201ENSMUST00000194021 2147 ntBASIC22.83■■□□□ 1.25
Chmp7Q8R1T1 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC22.83■■□□□ 1.25
Chmp7Q8R1T1 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC22.83■■□□□ 1.25
Chmp7Q8R1T1 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Chmp7Q8R1T1 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Chmp7Q8R1T1 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Chmp7Q8R1T1 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC22.83■■□□□ 1.25
Chmp7Q8R1T1 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Chmp7Q8R1T1 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms