Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
H2afjQ8R1M2 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
H2afjQ8R1M2 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
H2afjQ8R1M2 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
H2afjQ8R1M2 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
H2afjQ8R1M2 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
H2afjQ8R1M2 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
H2afjQ8R1M2 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.64■□□□□ 0.25
H2afjQ8R1M2 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
H2afjQ8R1M2 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
H2afjQ8R1M2 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
H2afjQ8R1M2 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
H2afjQ8R1M2 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.64■□□□□ 0.25
H2afjQ8R1M2 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.64■□□□□ 0.25
H2afjQ8R1M2 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
H2afjQ8R1M2 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
H2afjQ8R1M2 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
H2afjQ8R1M2 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
H2afjQ8R1M2 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
H2afjQ8R1M2 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
H2afjQ8R1M2 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
H2afjQ8R1M2 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2afjQ8R1M2 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2afjQ8R1M2 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
H2afjQ8R1M2 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.63■□□□□ 0.25
H2afjQ8R1M2 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.63■□□□□ 0.25
H2afjQ8R1M2 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.63■□□□□ 0.25
H2afjQ8R1M2 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
H2afjQ8R1M2 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.63■□□□□ 0.25
H2afjQ8R1M2 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
H2afjQ8R1M2 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2afjQ8R1M2 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2afjQ8R1M2 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2afjQ8R1M2 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
H2afjQ8R1M2 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.62■□□□□ 0.25
H2afjQ8R1M2 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.62■□□□□ 0.25
H2afjQ8R1M2 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
H2afjQ8R1M2 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
H2afjQ8R1M2 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
H2afjQ8R1M2 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.62■□□□□ 0.25
H2afjQ8R1M2 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
H2afjQ8R1M2 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
H2afjQ8R1M2 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
H2afjQ8R1M2 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
H2afjQ8R1M2 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
H2afjQ8R1M2 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
H2afjQ8R1M2 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
H2afjQ8R1M2 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
H2afjQ8R1M2 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
H2afjQ8R1M2 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
H2afjQ8R1M2 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
H2afjQ8R1M2 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
H2afjQ8R1M2 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
H2afjQ8R1M2 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
H2afjQ8R1M2 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
H2afjQ8R1M2 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
H2afjQ8R1M2 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
H2afjQ8R1M2 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
H2afjQ8R1M2 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
H2afjQ8R1M2 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
H2afjQ8R1M2 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
H2afjQ8R1M2 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
H2afjQ8R1M2 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
H2afjQ8R1M2 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
H2afjQ8R1M2 Gm13534-201ENSMUST00000121169 513 ntBASIC16.61■□□□□ 0.25
H2afjQ8R1M2 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
H2afjQ8R1M2 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
H2afjQ8R1M2 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
H2afjQ8R1M2 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
H2afjQ8R1M2 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
H2afjQ8R1M2 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
H2afjQ8R1M2 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
H2afjQ8R1M2 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
H2afjQ8R1M2 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
H2afjQ8R1M2 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
H2afjQ8R1M2 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
H2afjQ8R1M2 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
H2afjQ8R1M2 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
H2afjQ8R1M2 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
H2afjQ8R1M2 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
H2afjQ8R1M2 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2afjQ8R1M2 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2afjQ8R1M2 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2afjQ8R1M2 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2afjQ8R1M2 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
H2afjQ8R1M2 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.59■□□□□ 0.25
H2afjQ8R1M2 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
H2afjQ8R1M2 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.59■□□□□ 0.25
H2afjQ8R1M2 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2afjQ8R1M2 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2afjQ8R1M2 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2afjQ8R1M2 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2afjQ8R1M2 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.59■□□□□ 0.25
H2afjQ8R1M2 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2afjQ8R1M2 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2afjQ8R1M2 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2afjQ8R1M2 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
H2afjQ8R1M2 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2afjQ8R1M2 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2afjQ8R1M2 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms