Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Zcchc9Q8R1J3 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Zcchc9Q8R1J3 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Zcchc9Q8R1J3 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Zcchc9Q8R1J3 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Zcchc9Q8R1J3 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Zcchc9Q8R1J3 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Zcchc9Q8R1J3 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Zcchc9Q8R1J3 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Zcchc9Q8R1J3 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Zcchc9Q8R1J3 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Zcchc9Q8R1J3 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Zcchc9Q8R1J3 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
Zcchc9Q8R1J3 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Zcchc9Q8R1J3 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.8■□□□□ 0.44
Zcchc9Q8R1J3 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Zcchc9Q8R1J3 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Zcchc9Q8R1J3 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.8■□□□□ 0.44
Zcchc9Q8R1J3 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Zcchc9Q8R1J3 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Zcchc9Q8R1J3 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Zcchc9Q8R1J3 Zfp783-201ENSMUST00000095946 670 ntBASIC17.8■□□□□ 0.44
Zcchc9Q8R1J3 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Zcchc9Q8R1J3 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Zcchc9Q8R1J3 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Zcchc9Q8R1J3 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Zcchc9Q8R1J3 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Zcchc9Q8R1J3 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Zcchc9Q8R1J3 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Zcchc9Q8R1J3 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.8■□□□□ 0.44
Zcchc9Q8R1J3 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.8■□□□□ 0.44
Zcchc9Q8R1J3 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Zcchc9Q8R1J3 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.79■□□□□ 0.44
Zcchc9Q8R1J3 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Zcchc9Q8R1J3 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Zcchc9Q8R1J3 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Zcchc9Q8R1J3 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Zcchc9Q8R1J3 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.79■□□□□ 0.44
Zcchc9Q8R1J3 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Zcchc9Q8R1J3 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.79■□□□□ 0.44
Zcchc9Q8R1J3 Gm6433-201ENSMUST00000118634 875 ntBASIC17.79■□□□□ 0.44
Zcchc9Q8R1J3 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Zcchc9Q8R1J3 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Zcchc9Q8R1J3 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.79■□□□□ 0.44
Zcchc9Q8R1J3 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Zcchc9Q8R1J3 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Zcchc9Q8R1J3 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Zcchc9Q8R1J3 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Zcchc9Q8R1J3 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Zcchc9Q8R1J3 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Zcchc9Q8R1J3 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Zcchc9Q8R1J3 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Zcchc9Q8R1J3 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.79■□□□□ 0.44
Zcchc9Q8R1J3 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Zcchc9Q8R1J3 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Zcchc9Q8R1J3 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Zcchc9Q8R1J3 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Zcchc9Q8R1J3 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Zcchc9Q8R1J3 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Zcchc9Q8R1J3 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Zcchc9Q8R1J3 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Zcchc9Q8R1J3 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Zcchc9Q8R1J3 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.78■□□□□ 0.44
Zcchc9Q8R1J3 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.78■□□□□ 0.44
Zcchc9Q8R1J3 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Zcchc9Q8R1J3 Gm10138-203ENSMUST00000206952 366 ntBASIC17.78■□□□□ 0.44
Zcchc9Q8R1J3 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Zcchc9Q8R1J3 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Zcchc9Q8R1J3 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.78■□□□□ 0.44
Zcchc9Q8R1J3 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Zcchc9Q8R1J3 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Zcchc9Q8R1J3 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Zcchc9Q8R1J3 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Zcchc9Q8R1J3 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Zcchc9Q8R1J3 Gm10231-201ENSMUST00000181584 441 ntBASIC17.77■□□□□ 0.44
Zcchc9Q8R1J3 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Zcchc9Q8R1J3 Gm10175-202ENSMUST00000208752 441 ntBASIC17.77■□□□□ 0.44
Zcchc9Q8R1J3 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.77■□□□□ 0.44
Zcchc9Q8R1J3 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Zcchc9Q8R1J3 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Zcchc9Q8R1J3 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Zcchc9Q8R1J3 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Zcchc9Q8R1J3 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Zcchc9Q8R1J3 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Zcchc9Q8R1J3 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Zcchc9Q8R1J3 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Zcchc9Q8R1J3 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Zcchc9Q8R1J3 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Zcchc9Q8R1J3 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Zcchc9Q8R1J3 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Zcchc9Q8R1J3 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Zcchc9Q8R1J3 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Zcchc9Q8R1J3 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Zcchc9Q8R1J3 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Zcchc9Q8R1J3 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.76■□□□□ 0.43
Zcchc9Q8R1J3 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Zcchc9Q8R1J3 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Zcchc9Q8R1J3 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Zcchc9Q8R1J3 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Zcchc9Q8R1J3 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms