Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pdlim2Q8R1G6 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pdlim2Q8R1G6 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pdlim2Q8R1G6 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.58■□□□□ 0.89
Pdlim2Q8R1G6 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pdlim2Q8R1G6 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pdlim2Q8R1G6 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC20.58■□□□□ 0.89
Pdlim2Q8R1G6 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pdlim2Q8R1G6 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.58■□□□□ 0.89
Pdlim2Q8R1G6 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pdlim2Q8R1G6 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Pdlim2Q8R1G6 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pdlim2Q8R1G6 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pdlim2Q8R1G6 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pdlim2Q8R1G6 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pdlim2Q8R1G6 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pdlim2Q8R1G6 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pdlim2Q8R1G6 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pdlim2Q8R1G6 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Pdlim2Q8R1G6 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pdlim2Q8R1G6 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pdlim2Q8R1G6 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Pdlim2Q8R1G6 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pdlim2Q8R1G6 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pdlim2Q8R1G6 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pdlim2Q8R1G6 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pdlim2Q8R1G6 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pdlim2Q8R1G6 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Pdlim2Q8R1G6 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pdlim2Q8R1G6 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pdlim2Q8R1G6 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pdlim2Q8R1G6 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pdlim2Q8R1G6 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.56■□□□□ 0.88
Pdlim2Q8R1G6 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pdlim2Q8R1G6 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pdlim2Q8R1G6 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pdlim2Q8R1G6 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pdlim2Q8R1G6 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC20.56■□□□□ 0.88
Pdlim2Q8R1G6 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pdlim2Q8R1G6 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pdlim2Q8R1G6 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pdlim2Q8R1G6 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pdlim2Q8R1G6 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
Pdlim2Q8R1G6 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.55■□□□□ 0.88
Pdlim2Q8R1G6 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.55■□□□□ 0.88
Pdlim2Q8R1G6 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.55■□□□□ 0.88
Pdlim2Q8R1G6 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.55■□□□□ 0.88
Pdlim2Q8R1G6 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.55■□□□□ 0.88
Pdlim2Q8R1G6 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pdlim2Q8R1G6 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC20.55■□□□□ 0.88
Pdlim2Q8R1G6 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pdlim2Q8R1G6 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pdlim2Q8R1G6 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pdlim2Q8R1G6 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pdlim2Q8R1G6 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pdlim2Q8R1G6 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pdlim2Q8R1G6 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pdlim2Q8R1G6 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pdlim2Q8R1G6 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Pdlim2Q8R1G6 Gm15546-201ENSMUST00000122095 826 ntBASIC20.54■□□□□ 0.88
Pdlim2Q8R1G6 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pdlim2Q8R1G6 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pdlim2Q8R1G6 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.54■□□□□ 0.88
Pdlim2Q8R1G6 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pdlim2Q8R1G6 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pdlim2Q8R1G6 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pdlim2Q8R1G6 Gm19430-201ENSMUST00000193847 2137 ntBASIC20.54■□□□□ 0.88
Pdlim2Q8R1G6 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pdlim2Q8R1G6 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
Pdlim2Q8R1G6 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC20.54■□□□□ 0.88
Pdlim2Q8R1G6 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Pdlim2Q8R1G6 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pdlim2Q8R1G6 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pdlim2Q8R1G6 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pdlim2Q8R1G6 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Pdlim2Q8R1G6 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pdlim2Q8R1G6 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pdlim2Q8R1G6 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.53■□□□□ 0.88
Pdlim2Q8R1G6 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pdlim2Q8R1G6 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.53■□□□□ 0.88
Pdlim2Q8R1G6 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pdlim2Q8R1G6 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pdlim2Q8R1G6 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pdlim2Q8R1G6 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC20.53■□□□□ 0.88
Pdlim2Q8R1G6 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pdlim2Q8R1G6 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pdlim2Q8R1G6 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC20.53■□□□□ 0.88
Pdlim2Q8R1G6 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pdlim2Q8R1G6 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pdlim2Q8R1G6 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pdlim2Q8R1G6 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pdlim2Q8R1G6 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pdlim2Q8R1G6 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pdlim2Q8R1G6 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pdlim2Q8R1G6 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pdlim2Q8R1G6 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pdlim2Q8R1G6 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pdlim2Q8R1G6 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pdlim2Q8R1G6 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pdlim2Q8R1G6 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms