Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC21.87■■□□□ 1.09
Sf3a1Q8K4Z5 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sf3a1Q8K4Z5 Gm13158-201ENSMUST00000122007 736 ntBASIC21.87■■□□□ 1.09
Sf3a1Q8K4Z5 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Sf3a1Q8K4Z5 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC21.87■■□□□ 1.09
Sf3a1Q8K4Z5 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Sf3a1Q8K4Z5 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sf3a1Q8K4Z5 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sf3a1Q8K4Z5 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sf3a1Q8K4Z5 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sf3a1Q8K4Z5 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC21.86■■□□□ 1.09
Sf3a1Q8K4Z5 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Sf3a1Q8K4Z5 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC21.86■■□□□ 1.09
Sf3a1Q8K4Z5 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sf3a1Q8K4Z5 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Sf3a1Q8K4Z5 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sf3a1Q8K4Z5 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC21.86■■□□□ 1.09
Sf3a1Q8K4Z5 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Sf3a1Q8K4Z5 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Sf3a1Q8K4Z5 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sf3a1Q8K4Z5 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sf3a1Q8K4Z5 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sf3a1Q8K4Z5 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sf3a1Q8K4Z5 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Sf3a1Q8K4Z5 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Sf3a1Q8K4Z5 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sf3a1Q8K4Z5 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sf3a1Q8K4Z5 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sf3a1Q8K4Z5 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sf3a1Q8K4Z5 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Sf3a1Q8K4Z5 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Sf3a1Q8K4Z5 Gm5643-201ENSMUST00000117081 966 ntBASIC21.84■■□□□ 1.09
Sf3a1Q8K4Z5 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Sf3a1Q8K4Z5 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Sf3a1Q8K4Z5 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Sf3a1Q8K4Z5 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC21.84■■□□□ 1.09
Sf3a1Q8K4Z5 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC21.84■■□□□ 1.09
Sf3a1Q8K4Z5 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Sf3a1Q8K4Z5 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Sf3a1Q8K4Z5 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Sf3a1Q8K4Z5 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Sf3a1Q8K4Z5 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Sf3a1Q8K4Z5 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Sf3a1Q8K4Z5 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Sf3a1Q8K4Z5 AC112142.1-201ENSMUST00000228796 918 ntBASIC21.83■■□□□ 1.09
Sf3a1Q8K4Z5 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC21.83■■□□□ 1.09
Sf3a1Q8K4Z5 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Sf3a1Q8K4Z5 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
Sf3a1Q8K4Z5 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC21.83■■□□□ 1.08
Sf3a1Q8K4Z5 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
Sf3a1Q8K4Z5 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Sf3a1Q8K4Z5 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Sf3a1Q8K4Z5 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC21.83■■□□□ 1.08
Sf3a1Q8K4Z5 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Sf3a1Q8K4Z5 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Sf3a1Q8K4Z5 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Sf3a1Q8K4Z5 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Sf3a1Q8K4Z5 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Sf3a1Q8K4Z5 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Sf3a1Q8K4Z5 Gm18666-201ENSMUST00000190039 958 ntBASIC21.82■■□□□ 1.08
Sf3a1Q8K4Z5 Gm10138-203ENSMUST00000206952 366 ntBASIC21.82■■□□□ 1.08
Sf3a1Q8K4Z5 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Sf3a1Q8K4Z5 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Sf3a1Q8K4Z5 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Sf3a1Q8K4Z5 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sf3a1Q8K4Z5 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sf3a1Q8K4Z5 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Sf3a1Q8K4Z5 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sf3a1Q8K4Z5 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC21.81■■□□□ 1.08
Sf3a1Q8K4Z5 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sf3a1Q8K4Z5 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sf3a1Q8K4Z5 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sf3a1Q8K4Z5 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sf3a1Q8K4Z5 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Sf3a1Q8K4Z5 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Sf3a1Q8K4Z5 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sf3a1Q8K4Z5 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sf3a1Q8K4Z5 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
Sf3a1Q8K4Z5 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Sf3a1Q8K4Z5 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Sf3a1Q8K4Z5 Gm13168-201ENSMUST00000121771 632 ntBASIC21.8■■□□□ 1.08
Sf3a1Q8K4Z5 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Sf3a1Q8K4Z5 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC21.8■■□□□ 1.08
Sf3a1Q8K4Z5 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
Sf3a1Q8K4Z5 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sf3a1Q8K4Z5 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sf3a1Q8K4Z5 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Sf3a1Q8K4Z5 Rarb-207ENSMUST00000225921 2756 ntBASIC21.79■■□□□ 1.08
Sf3a1Q8K4Z5 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sf3a1Q8K4Z5 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sf3a1Q8K4Z5 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sf3a1Q8K4Z5 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sf3a1Q8K4Z5 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sf3a1Q8K4Z5 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC21.79■■□□□ 1.08
Sf3a1Q8K4Z5 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Sf3a1Q8K4Z5 Nrn1-203ENSMUST00000223611 1443 ntBASIC21.79■■□□□ 1.08
Sf3a1Q8K4Z5 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sf3a1Q8K4Z5 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC21.79■■□□□ 1.08
Sf3a1Q8K4Z5 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sf3a1Q8K4Z5 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms