Protein–RNA interactions for Protein: Q8K2Y7

Mrpl47, 39S ribosomal protein L47, mitochondrial, mousemouse

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl47Q8K2Y7 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mrpl47Q8K2Y7 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.75■□□□□ 0.43
Mrpl47Q8K2Y7 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mrpl47Q8K2Y7 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mrpl47Q8K2Y7 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mrpl47Q8K2Y7 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mrpl47Q8K2Y7 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mrpl47Q8K2Y7 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Mrpl47Q8K2Y7 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Mrpl47Q8K2Y7 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mrpl47Q8K2Y7 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mrpl47Q8K2Y7 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Mrpl47Q8K2Y7 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mrpl47Q8K2Y7 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Mrpl47Q8K2Y7 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mrpl47Q8K2Y7 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Mrpl47Q8K2Y7 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mrpl47Q8K2Y7 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mrpl47Q8K2Y7 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mrpl47Q8K2Y7 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
Mrpl47Q8K2Y7 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Mrpl47Q8K2Y7 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mrpl47Q8K2Y7 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mrpl47Q8K2Y7 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mrpl47Q8K2Y7 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Mrpl47Q8K2Y7 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Mrpl47Q8K2Y7 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mrpl47Q8K2Y7 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mrpl47Q8K2Y7 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mrpl47Q8K2Y7 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mrpl47Q8K2Y7 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Mrpl47Q8K2Y7 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mrpl47Q8K2Y7 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mrpl47Q8K2Y7 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.73■□□□□ 0.43
Mrpl47Q8K2Y7 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Mrpl47Q8K2Y7 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Mrpl47Q8K2Y7 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mrpl47Q8K2Y7 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Mrpl47Q8K2Y7 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mrpl47Q8K2Y7 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Mrpl47Q8K2Y7 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mrpl47Q8K2Y7 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mrpl47Q8K2Y7 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mrpl47Q8K2Y7 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.72■□□□□ 0.43
Mrpl47Q8K2Y7 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Mrpl47Q8K2Y7 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Mrpl47Q8K2Y7 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.72■□□□□ 0.43
Mrpl47Q8K2Y7 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mrpl47Q8K2Y7 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mrpl47Q8K2Y7 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mrpl47Q8K2Y7 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mrpl47Q8K2Y7 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mrpl47Q8K2Y7 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mrpl47Q8K2Y7 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Mrpl47Q8K2Y7 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mrpl47Q8K2Y7 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mrpl47Q8K2Y7 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mrpl47Q8K2Y7 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mrpl47Q8K2Y7 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mrpl47Q8K2Y7 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Mrpl47Q8K2Y7 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mrpl47Q8K2Y7 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Mrpl47Q8K2Y7 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Mrpl47Q8K2Y7 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mrpl47Q8K2Y7 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mrpl47Q8K2Y7 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mrpl47Q8K2Y7 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.71■□□□□ 0.43
Mrpl47Q8K2Y7 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Mrpl47Q8K2Y7 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mrpl47Q8K2Y7 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mrpl47Q8K2Y7 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Mrpl47Q8K2Y7 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mrpl47Q8K2Y7 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Mrpl47Q8K2Y7 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.7■□□□□ 0.42
Mrpl47Q8K2Y7 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mrpl47Q8K2Y7 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
Mrpl47Q8K2Y7 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Mrpl47Q8K2Y7 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mrpl47Q8K2Y7 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mrpl47Q8K2Y7 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.7■□□□□ 0.42
Mrpl47Q8K2Y7 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Mrpl47Q8K2Y7 Gm6420-201ENSMUST00000193885 723 ntBASIC17.7■□□□□ 0.42
Mrpl47Q8K2Y7 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mrpl47Q8K2Y7 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mrpl47Q8K2Y7 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mrpl47Q8K2Y7 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mrpl47Q8K2Y7 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mrpl47Q8K2Y7 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Mrpl47Q8K2Y7 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Mrpl47Q8K2Y7 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mrpl47Q8K2Y7 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mrpl47Q8K2Y7 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mrpl47Q8K2Y7 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Mrpl47Q8K2Y7 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mrpl47Q8K2Y7 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mrpl47Q8K2Y7 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.69■□□□□ 0.42
Mrpl47Q8K2Y7 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Mrpl47Q8K2Y7 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Mrpl47Q8K2Y7 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Mrpl47Q8K2Y7 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms