Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfwd3Q8CIK8 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfwd3Q8CIK8 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Rfwd3Q8CIK8 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Rfwd3Q8CIK8 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rfwd3Q8CIK8 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfwd3Q8CIK8 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfwd3Q8CIK8 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfwd3Q8CIK8 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfwd3Q8CIK8 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfwd3Q8CIK8 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfwd3Q8CIK8 Dio3-201ENSMUST00000097228 1449 ntBASIC16.8■□□□□ 0.28
Rfwd3Q8CIK8 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.8■□□□□ 0.28
Rfwd3Q8CIK8 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfwd3Q8CIK8 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfwd3Q8CIK8 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Rfwd3Q8CIK8 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.8■□□□□ 0.28
Rfwd3Q8CIK8 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.8■□□□□ 0.28
Rfwd3Q8CIK8 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.8■□□□□ 0.28
Rfwd3Q8CIK8 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfwd3Q8CIK8 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfwd3Q8CIK8 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rfwd3Q8CIK8 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.8■□□□□ 0.28
Rfwd3Q8CIK8 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfwd3Q8CIK8 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfwd3Q8CIK8 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.8■□□□□ 0.28
Rfwd3Q8CIK8 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Rfwd3Q8CIK8 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfwd3Q8CIK8 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfwd3Q8CIK8 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rfwd3Q8CIK8 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rfwd3Q8CIK8 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.79■□□□□ 0.28
Rfwd3Q8CIK8 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.79■□□□□ 0.28
Rfwd3Q8CIK8 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rfwd3Q8CIK8 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.79■□□□□ 0.28
Rfwd3Q8CIK8 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rfwd3Q8CIK8 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rfwd3Q8CIK8 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rfwd3Q8CIK8 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rfwd3Q8CIK8 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.79■□□□□ 0.28
Rfwd3Q8CIK8 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rfwd3Q8CIK8 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rfwd3Q8CIK8 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Rfwd3Q8CIK8 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rfwd3Q8CIK8 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Rfwd3Q8CIK8 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rfwd3Q8CIK8 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rfwd3Q8CIK8 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rfwd3Q8CIK8 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rfwd3Q8CIK8 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rfwd3Q8CIK8 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfwd3Q8CIK8 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfwd3Q8CIK8 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfwd3Q8CIK8 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfwd3Q8CIK8 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.78■□□□□ 0.28
Rfwd3Q8CIK8 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.78■□□□□ 0.28
Rfwd3Q8CIK8 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.78■□□□□ 0.28
Rfwd3Q8CIK8 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfwd3Q8CIK8 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfwd3Q8CIK8 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfwd3Q8CIK8 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfwd3Q8CIK8 Flg-201ENSMUST00000050758 1488 ntBASIC16.78■□□□□ 0.28
Rfwd3Q8CIK8 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfwd3Q8CIK8 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfwd3Q8CIK8 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfwd3Q8CIK8 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfwd3Q8CIK8 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfwd3Q8CIK8 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rfwd3Q8CIK8 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rfwd3Q8CIK8 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rfwd3Q8CIK8 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
Rfwd3Q8CIK8 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
Rfwd3Q8CIK8 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Rfwd3Q8CIK8 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rfwd3Q8CIK8 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Rfwd3Q8CIK8 Gm12896-201ENSMUST00000118430 226 ntBASIC16.77■□□□□ 0.28
Rfwd3Q8CIK8 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.77■□□□□ 0.28
Rfwd3Q8CIK8 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rfwd3Q8CIK8 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rfwd3Q8CIK8 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rfwd3Q8CIK8 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Rfwd3Q8CIK8 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rfwd3Q8CIK8 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Rfwd3Q8CIK8 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rfwd3Q8CIK8 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
Rfwd3Q8CIK8 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.77■□□□□ 0.27
Rfwd3Q8CIK8 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rfwd3Q8CIK8 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rfwd3Q8CIK8 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rfwd3Q8CIK8 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rfwd3Q8CIK8 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rfwd3Q8CIK8 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rfwd3Q8CIK8 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rfwd3Q8CIK8 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.76■□□□□ 0.27
Rfwd3Q8CIK8 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.76■□□□□ 0.27
Rfwd3Q8CIK8 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rfwd3Q8CIK8 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Rfwd3Q8CIK8 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Rfwd3Q8CIK8 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rfwd3Q8CIK8 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms