Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Syne4Q8CII8 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Syne4Q8CII8 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Syne4Q8CII8 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Syne4Q8CII8 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.28■□□□□ 0.84
Syne4Q8CII8 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Syne4Q8CII8 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Syne4Q8CII8 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Syne4Q8CII8 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Syne4Q8CII8 Gm27389-201ENSMUST00000183622 195 ntBASIC20.28■□□□□ 0.84
Syne4Q8CII8 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC20.28■□□□□ 0.84
Syne4Q8CII8 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Syne4Q8CII8 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Syne4Q8CII8 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Syne4Q8CII8 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Syne4Q8CII8 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Syne4Q8CII8 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Syne4Q8CII8 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Syne4Q8CII8 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Syne4Q8CII8 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Syne4Q8CII8 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Syne4Q8CII8 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.27■□□□□ 0.84
Syne4Q8CII8 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Syne4Q8CII8 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Syne4Q8CII8 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Syne4Q8CII8 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Syne4Q8CII8 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Syne4Q8CII8 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Syne4Q8CII8 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Syne4Q8CII8 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Syne4Q8CII8 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Syne4Q8CII8 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Syne4Q8CII8 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Syne4Q8CII8 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Syne4Q8CII8 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Syne4Q8CII8 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC20.26■□□□□ 0.83
Syne4Q8CII8 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC20.26■□□□□ 0.83
Syne4Q8CII8 Gm5587-201ENSMUST00000206270 674 ntBASIC20.26■□□□□ 0.83
Syne4Q8CII8 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Syne4Q8CII8 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Syne4Q8CII8 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Syne4Q8CII8 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Syne4Q8CII8 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Syne4Q8CII8 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Syne4Q8CII8 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Syne4Q8CII8 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Syne4Q8CII8 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Syne4Q8CII8 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Syne4Q8CII8 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Syne4Q8CII8 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Syne4Q8CII8 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Syne4Q8CII8 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Syne4Q8CII8 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Syne4Q8CII8 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Syne4Q8CII8 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Syne4Q8CII8 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Syne4Q8CII8 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Syne4Q8CII8 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Syne4Q8CII8 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC20.24■□□□□ 0.83
Syne4Q8CII8 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Syne4Q8CII8 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Syne4Q8CII8 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Syne4Q8CII8 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Syne4Q8CII8 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Syne4Q8CII8 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Syne4Q8CII8 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Syne4Q8CII8 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Syne4Q8CII8 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Syne4Q8CII8 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Syne4Q8CII8 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC20.23■□□□□ 0.83
Syne4Q8CII8 Gm24841-201ENSMUST00000158676 357 ntBASIC20.23■□□□□ 0.83
Syne4Q8CII8 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Syne4Q8CII8 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Syne4Q8CII8 Gm7370-201ENSMUST00000219471 767 ntBASIC20.23■□□□□ 0.83
Syne4Q8CII8 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Syne4Q8CII8 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Syne4Q8CII8 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.23■□□□□ 0.83
Syne4Q8CII8 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Syne4Q8CII8 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Syne4Q8CII8 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Syne4Q8CII8 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Syne4Q8CII8 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Syne4Q8CII8 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Syne4Q8CII8 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Syne4Q8CII8 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Syne4Q8CII8 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Syne4Q8CII8 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Syne4Q8CII8 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Syne4Q8CII8 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Syne4Q8CII8 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Syne4Q8CII8 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Syne4Q8CII8 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Syne4Q8CII8 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Syne4Q8CII8 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Syne4Q8CII8 Gm9013-201ENSMUST00000132939 882 ntBASIC20.21■□□□□ 0.83
Syne4Q8CII8 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC20.21■□□□□ 0.83
Syne4Q8CII8 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Syne4Q8CII8 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC20.21■□□□□ 0.83
Syne4Q8CII8 Gm29518-201ENSMUST00000190858 372 ntBASIC20.21■□□□□ 0.83
Syne4Q8CII8 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms