Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rp1l1Q8CGM2 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.69■□□□□ 0.58
Rp1l1Q8CGM2 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC18.69■□□□□ 0.58
Rp1l1Q8CGM2 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rp1l1Q8CGM2 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rp1l1Q8CGM2 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rp1l1Q8CGM2 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rp1l1Q8CGM2 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.69■□□□□ 0.58
Rp1l1Q8CGM2 Mir770-201ENSMUST00000103252 94 ntBASIC18.69■□□□□ 0.58
Rp1l1Q8CGM2 Gm11355-201ENSMUST00000121120 306 ntBASIC18.69■□□□□ 0.58
Rp1l1Q8CGM2 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rp1l1Q8CGM2 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC18.69■□□□□ 0.58
Rp1l1Q8CGM2 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rp1l1Q8CGM2 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rp1l1Q8CGM2 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Rp1l1Q8CGM2 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rp1l1Q8CGM2 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.68■□□□□ 0.58
Rp1l1Q8CGM2 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rp1l1Q8CGM2 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Rp1l1Q8CGM2 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rp1l1Q8CGM2 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.68■□□□□ 0.58
Rp1l1Q8CGM2 Il3ra-202ENSMUST00000223589 738 ntBASIC18.68■□□□□ 0.58
Rp1l1Q8CGM2 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rp1l1Q8CGM2 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rp1l1Q8CGM2 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rp1l1Q8CGM2 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rp1l1Q8CGM2 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rp1l1Q8CGM2 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.67■□□□□ 0.58
Rp1l1Q8CGM2 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rp1l1Q8CGM2 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rp1l1Q8CGM2 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rp1l1Q8CGM2 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rp1l1Q8CGM2 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.67■□□□□ 0.58
Rp1l1Q8CGM2 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rp1l1Q8CGM2 Gm10418-201ENSMUST00000100943 576 ntBASIC18.67■□□□□ 0.58
Rp1l1Q8CGM2 Gm25925-201ENSMUST00000158314 306 ntBASIC18.67■□□□□ 0.58
Rp1l1Q8CGM2 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Rp1l1Q8CGM2 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC18.67■□□□□ 0.58
Rp1l1Q8CGM2 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Rp1l1Q8CGM2 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rp1l1Q8CGM2 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rp1l1Q8CGM2 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Rp1l1Q8CGM2 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rp1l1Q8CGM2 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Rp1l1Q8CGM2 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rp1l1Q8CGM2 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rp1l1Q8CGM2 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rp1l1Q8CGM2 Mir3081-201ENSMUST00000175305 84 ntBASIC18.66■□□□□ 0.58
Rp1l1Q8CGM2 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Rp1l1Q8CGM2 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
Rp1l1Q8CGM2 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rp1l1Q8CGM2 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rp1l1Q8CGM2 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Rp1l1Q8CGM2 Gm37722-201ENSMUST00000193757 208 ntBASIC18.65■□□□□ 0.58
Rp1l1Q8CGM2 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rp1l1Q8CGM2 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rp1l1Q8CGM2 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rp1l1Q8CGM2 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.65■□□□□ 0.58
Rp1l1Q8CGM2 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rp1l1Q8CGM2 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rp1l1Q8CGM2 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rp1l1Q8CGM2 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Rp1l1Q8CGM2 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rp1l1Q8CGM2 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rp1l1Q8CGM2 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rp1l1Q8CGM2 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Rp1l1Q8CGM2 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rp1l1Q8CGM2 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.64■□□□□ 0.57
Rp1l1Q8CGM2 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rp1l1Q8CGM2 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
Rp1l1Q8CGM2 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.64■□□□□ 0.57
Rp1l1Q8CGM2 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rp1l1Q8CGM2 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rp1l1Q8CGM2 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rp1l1Q8CGM2 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Rp1l1Q8CGM2 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rp1l1Q8CGM2 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rp1l1Q8CGM2 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rp1l1Q8CGM2 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Rp1l1Q8CGM2 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rp1l1Q8CGM2 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rp1l1Q8CGM2 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.63■□□□□ 0.57
Rp1l1Q8CGM2 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC18.63■□□□□ 0.57
Rp1l1Q8CGM2 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rp1l1Q8CGM2 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.63■□□□□ 0.57
Rp1l1Q8CGM2 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rp1l1Q8CGM2 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rp1l1Q8CGM2 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rp1l1Q8CGM2 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rp1l1Q8CGM2 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rp1l1Q8CGM2 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rp1l1Q8CGM2 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.62■□□□□ 0.57
Rp1l1Q8CGM2 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC18.62■□□□□ 0.57
Rp1l1Q8CGM2 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rp1l1Q8CGM2 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rp1l1Q8CGM2 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rp1l1Q8CGM2 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Rp1l1Q8CGM2 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Rp1l1Q8CGM2 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rp1l1Q8CGM2 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms