Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.44■□□□□ 0.38
Rab43Q8CG50 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rab43Q8CG50 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rab43Q8CG50 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rab43Q8CG50 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rab43Q8CG50 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.43■□□□□ 0.38
Rab43Q8CG50 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Rab43Q8CG50 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rab43Q8CG50 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Rab43Q8CG50 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rab43Q8CG50 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rab43Q8CG50 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rab43Q8CG50 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rab43Q8CG50 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rab43Q8CG50 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.42■□□□□ 0.38
Rab43Q8CG50 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rab43Q8CG50 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.42■□□□□ 0.38
Rab43Q8CG50 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.42■□□□□ 0.38
Rab43Q8CG50 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rab43Q8CG50 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rab43Q8CG50 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rab43Q8CG50 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rab43Q8CG50 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rab43Q8CG50 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.42■□□□□ 0.38
Rab43Q8CG50 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.42■□□□□ 0.38
Rab43Q8CG50 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rab43Q8CG50 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rab43Q8CG50 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.42■□□□□ 0.38
Rab43Q8CG50 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rab43Q8CG50 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rab43Q8CG50 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rab43Q8CG50 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rab43Q8CG50 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rab43Q8CG50 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rab43Q8CG50 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Rab43Q8CG50 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rab43Q8CG50 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rab43Q8CG50 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Rab43Q8CG50 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rab43Q8CG50 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.41■□□□□ 0.38
Rab43Q8CG50 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rab43Q8CG50 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rab43Q8CG50 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.41■□□□□ 0.38
Rab43Q8CG50 Gm27463-201ENSMUST00000183569 57 ntBASIC17.41■□□□□ 0.38
Rab43Q8CG50 Gm10517-202ENSMUST00000192970 758 ntBASIC17.41■□□□□ 0.38
Rab43Q8CG50 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rab43Q8CG50 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rab43Q8CG50 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rab43Q8CG50 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rab43Q8CG50 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Rab43Q8CG50 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rab43Q8CG50 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rab43Q8CG50 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.4■□□□□ 0.38
Rab43Q8CG50 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rab43Q8CG50 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.4■□□□□ 0.38
Rab43Q8CG50 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rab43Q8CG50 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.4■□□□□ 0.38
Rab43Q8CG50 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.4■□□□□ 0.38
Rab43Q8CG50 Gm18959-201ENSMUST00000208954 655 ntBASIC17.4■□□□□ 0.38
Rab43Q8CG50 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.4■□□□□ 0.38
Rab43Q8CG50 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.4■□□□□ 0.38
Rab43Q8CG50 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Rab43Q8CG50 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Rab43Q8CG50 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Rab43Q8CG50 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rab43Q8CG50 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rab43Q8CG50 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rab43Q8CG50 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rab43Q8CG50 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rab43Q8CG50 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rab43Q8CG50 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rab43Q8CG50 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Rab43Q8CG50 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab43Q8CG50 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rab43Q8CG50 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab43Q8CG50 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.39■□□□□ 0.37
Rab43Q8CG50 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rab43Q8CG50 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab43Q8CG50 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab43Q8CG50 Gm12085-201ENSMUST00000119263 940 ntBASIC17.39■□□□□ 0.37
Rab43Q8CG50 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.39■□□□□ 0.37
Rab43Q8CG50 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rab43Q8CG50 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rab43Q8CG50 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.39■□□□□ 0.37
Rab43Q8CG50 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rab43Q8CG50 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab43Q8CG50 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab43Q8CG50 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Rab43Q8CG50 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab43Q8CG50 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab43Q8CG50 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab43Q8CG50 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Rab43Q8CG50 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rab43Q8CG50 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rab43Q8CG50 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.38■□□□□ 0.37
Rab43Q8CG50 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rab43Q8CG50 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rab43Q8CG50 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rab43Q8CG50 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rab43Q8CG50 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms