Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
Fam228aQ8CDW1 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fam228aQ8CDW1 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fam228aQ8CDW1 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fam228aQ8CDW1 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.81■□□□□ 0.6
Fam228aQ8CDW1 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Fam228aQ8CDW1 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Fam228aQ8CDW1 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.81■□□□□ 0.6
Fam228aQ8CDW1 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Fam228aQ8CDW1 Gm9988-201ENSMUST00000069786 435 ntBASIC18.81■□□□□ 0.6
Fam228aQ8CDW1 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fam228aQ8CDW1 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fam228aQ8CDW1 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fam228aQ8CDW1 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fam228aQ8CDW1 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fam228aQ8CDW1 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fam228aQ8CDW1 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fam228aQ8CDW1 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.81■□□□□ 0.6
Fam228aQ8CDW1 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fam228aQ8CDW1 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fam228aQ8CDW1 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fam228aQ8CDW1 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fam228aQ8CDW1 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fam228aQ8CDW1 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fam228aQ8CDW1 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Fam228aQ8CDW1 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.8■□□□□ 0.6
Fam228aQ8CDW1 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fam228aQ8CDW1 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fam228aQ8CDW1 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fam228aQ8CDW1 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fam228aQ8CDW1 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fam228aQ8CDW1 Gm13534-201ENSMUST00000121169 513 ntBASIC18.8■□□□□ 0.6
Fam228aQ8CDW1 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.8■□□□□ 0.6
Fam228aQ8CDW1 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Fam228aQ8CDW1 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.8■□□□□ 0.6
Fam228aQ8CDW1 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Fam228aQ8CDW1 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Fam228aQ8CDW1 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fam228aQ8CDW1 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fam228aQ8CDW1 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fam228aQ8CDW1 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Fam228aQ8CDW1 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.8■□□□□ 0.6
Fam228aQ8CDW1 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Fam228aQ8CDW1 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fam228aQ8CDW1 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Fam228aQ8CDW1 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Fam228aQ8CDW1 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Fam228aQ8CDW1 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.79■□□□□ 0.6
Fam228aQ8CDW1 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.79■□□□□ 0.6
Fam228aQ8CDW1 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Fam228aQ8CDW1 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Fam228aQ8CDW1 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Fam228aQ8CDW1 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.79■□□□□ 0.6
Fam228aQ8CDW1 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Fam228aQ8CDW1 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Fam228aQ8CDW1 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Fam228aQ8CDW1 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Fam228aQ8CDW1 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Fam228aQ8CDW1 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Fam228aQ8CDW1 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.78■□□□□ 0.6
Fam228aQ8CDW1 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Fam228aQ8CDW1 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Fam228aQ8CDW1 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Fam228aQ8CDW1 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Fam228aQ8CDW1 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Fam228aQ8CDW1 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Fam228aQ8CDW1 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Fam228aQ8CDW1 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Fam228aQ8CDW1 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Fam228aQ8CDW1 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Fam228aQ8CDW1 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Fam228aQ8CDW1 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Fam228aQ8CDW1 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Fam228aQ8CDW1 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Fam228aQ8CDW1 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Fam228aQ8CDW1 Reep4-203ENSMUST00000226563 1444 ntBASIC18.77■□□□□ 0.6
Fam228aQ8CDW1 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Fam228aQ8CDW1 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.77■□□□□ 0.6
Fam228aQ8CDW1 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Fam228aQ8CDW1 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Fam228aQ8CDW1 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
Fam228aQ8CDW1 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Fam228aQ8CDW1 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.76■□□□□ 0.59
Fam228aQ8CDW1 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Fam228aQ8CDW1 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Fam228aQ8CDW1 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Fam228aQ8CDW1 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Fam228aQ8CDW1 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Fam228aQ8CDW1 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Fam228aQ8CDW1 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Fam228aQ8CDW1 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.76■□□□□ 0.59
Fam228aQ8CDW1 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Fam228aQ8CDW1 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Fam228aQ8CDW1 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Fam228aQ8CDW1 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Fam228aQ8CDW1 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Fam228aQ8CDW1 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Fam228aQ8CDW1 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Fam228aQ8CDW1 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Fam228aQ8CDW1 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms