Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rfx6Q8C7R7 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rfx6Q8C7R7 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.19■□□□□ 0.5
Rfx6Q8C7R7 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.19■□□□□ 0.5
Rfx6Q8C7R7 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rfx6Q8C7R7 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rfx6Q8C7R7 Gm42778-201ENSMUST00000199644 553 ntBASIC18.19■□□□□ 0.5
Rfx6Q8C7R7 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rfx6Q8C7R7 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rfx6Q8C7R7 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rfx6Q8C7R7 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Rfx6Q8C7R7 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Rfx6Q8C7R7 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rfx6Q8C7R7 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Rfx6Q8C7R7 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Rfx6Q8C7R7 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Rfx6Q8C7R7 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rfx6Q8C7R7 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rfx6Q8C7R7 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.18■□□□□ 0.5
Rfx6Q8C7R7 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rfx6Q8C7R7 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rfx6Q8C7R7 Gm22325-201ENSMUST00000158904 308 ntBASIC18.18■□□□□ 0.5
Rfx6Q8C7R7 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.18■□□□□ 0.5
Rfx6Q8C7R7 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rfx6Q8C7R7 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rfx6Q8C7R7 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.18■□□□□ 0.5
Rfx6Q8C7R7 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Rfx6Q8C7R7 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Rfx6Q8C7R7 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rfx6Q8C7R7 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rfx6Q8C7R7 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.18■□□□□ 0.5
Rfx6Q8C7R7 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rfx6Q8C7R7 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfx6Q8C7R7 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfx6Q8C7R7 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfx6Q8C7R7 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfx6Q8C7R7 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rfx6Q8C7R7 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Rfx6Q8C7R7 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfx6Q8C7R7 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfx6Q8C7R7 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfx6Q8C7R7 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.17■□□□□ 0.5
Rfx6Q8C7R7 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Rfx6Q8C7R7 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfx6Q8C7R7 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfx6Q8C7R7 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfx6Q8C7R7 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfx6Q8C7R7 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfx6Q8C7R7 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfx6Q8C7R7 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfx6Q8C7R7 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfx6Q8C7R7 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rfx6Q8C7R7 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfx6Q8C7R7 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfx6Q8C7R7 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfx6Q8C7R7 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfx6Q8C7R7 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rfx6Q8C7R7 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Rfx6Q8C7R7 Gm6420-201ENSMUST00000193885 723 ntBASIC18.16■□□□□ 0.5
Rfx6Q8C7R7 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rfx6Q8C7R7 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rfx6Q8C7R7 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfx6Q8C7R7 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfx6Q8C7R7 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfx6Q8C7R7 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfx6Q8C7R7 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfx6Q8C7R7 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfx6Q8C7R7 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.16■□□□□ 0.5
Rfx6Q8C7R7 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfx6Q8C7R7 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rfx6Q8C7R7 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rfx6Q8C7R7 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfx6Q8C7R7 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfx6Q8C7R7 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfx6Q8C7R7 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfx6Q8C7R7 Nespas-201ENSMUST00000143738 1083 ntBASIC18.15■□□□□ 0.5
Rfx6Q8C7R7 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Rfx6Q8C7R7 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfx6Q8C7R7 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfx6Q8C7R7 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.15■□□□□ 0.5
Rfx6Q8C7R7 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfx6Q8C7R7 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfx6Q8C7R7 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfx6Q8C7R7 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Rfx6Q8C7R7 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
Rfx6Q8C7R7 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rfx6Q8C7R7 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rfx6Q8C7R7 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx6Q8C7R7 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
Rfx6Q8C7R7 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx6Q8C7R7 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx6Q8C7R7 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx6Q8C7R7 Gm8969-201ENSMUST00000199694 526 ntBASIC18.14■□□□□ 0.49
Rfx6Q8C7R7 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx6Q8C7R7 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx6Q8C7R7 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx6Q8C7R7 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx6Q8C7R7 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx6Q8C7R7 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx6Q8C7R7 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms