Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col6a6Q8C6K9 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col6a6Q8C6K9 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.13■□□□□ 0.17
Col6a6Q8C6K9 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Col6a6Q8C6K9 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col6a6Q8C6K9 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Col6a6Q8C6K9 Gm16061-201ENSMUST00000122167 857 ntBASIC16.13■□□□□ 0.17
Col6a6Q8C6K9 Gm27704-201ENSMUST00000185094 107 ntBASIC16.13■□□□□ 0.17
Col6a6Q8C6K9 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.13■□□□□ 0.17
Col6a6Q8C6K9 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Col6a6Q8C6K9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Col6a6Q8C6K9 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col6a6Q8C6K9 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.12■□□□□ 0.17
Col6a6Q8C6K9 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Col6a6Q8C6K9 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Col6a6Q8C6K9 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col6a6Q8C6K9 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col6a6Q8C6K9 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col6a6Q8C6K9 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col6a6Q8C6K9 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col6a6Q8C6K9 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col6a6Q8C6K9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col6a6Q8C6K9 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Col6a6Q8C6K9 Gm44771-201ENSMUST00000206975 626 ntBASIC16.12■□□□□ 0.17
Col6a6Q8C6K9 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.12■□□□□ 0.17
Col6a6Q8C6K9 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col6a6Q8C6K9 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col6a6Q8C6K9 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Col6a6Q8C6K9 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col6a6Q8C6K9 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col6a6Q8C6K9 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col6a6Q8C6K9 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col6a6Q8C6K9 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col6a6Q8C6K9 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Col6a6Q8C6K9 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Col6a6Q8C6K9 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Col6a6Q8C6K9 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col6a6Q8C6K9 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col6a6Q8C6K9 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
Col6a6Q8C6K9 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col6a6Q8C6K9 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.11■□□□□ 0.17
Col6a6Q8C6K9 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.11■□□□□ 0.17
Col6a6Q8C6K9 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col6a6Q8C6K9 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col6a6Q8C6K9 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col6a6Q8C6K9 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col6a6Q8C6K9 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Col6a6Q8C6K9 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col6a6Q8C6K9 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.11■□□□□ 0.17
Col6a6Q8C6K9 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col6a6Q8C6K9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Col6a6Q8C6K9 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Col6a6Q8C6K9 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.1■□□□□ 0.17
Col6a6Q8C6K9 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Col6a6Q8C6K9 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Col6a6Q8C6K9 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
Col6a6Q8C6K9 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Col6a6Q8C6K9 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.1■□□□□ 0.17
Col6a6Q8C6K9 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Col6a6Q8C6K9 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Col6a6Q8C6K9 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Col6a6Q8C6K9 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col6a6Q8C6K9 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col6a6Q8C6K9 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col6a6Q8C6K9 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col6a6Q8C6K9 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col6a6Q8C6K9 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col6a6Q8C6K9 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Col6a6Q8C6K9 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col6a6Q8C6K9 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Col6a6Q8C6K9 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Col6a6Q8C6K9 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col6a6Q8C6K9 Gm17807-201ENSMUST00000186869 298 ntBASIC16.08■□□□□ 0.17
Col6a6Q8C6K9 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col6a6Q8C6K9 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col6a6Q8C6K9 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col6a6Q8C6K9 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col6a6Q8C6K9 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Col6a6Q8C6K9 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Col6a6Q8C6K9 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.08■□□□□ 0.16
Col6a6Q8C6K9 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col6a6Q8C6K9 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col6a6Q8C6K9 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Col6a6Q8C6K9 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col6a6Q8C6K9 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Col6a6Q8C6K9 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Col6a6Q8C6K9 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.07■□□□□ 0.16
Col6a6Q8C6K9 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col6a6Q8C6K9 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.07■□□□□ 0.16
Col6a6Q8C6K9 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Col6a6Q8C6K9 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col6a6Q8C6K9 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Col6a6Q8C6K9 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.07■□□□□ 0.16
Col6a6Q8C6K9 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col6a6Q8C6K9 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Col6a6Q8C6K9 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Col6a6Q8C6K9 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Col6a6Q8C6K9 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col6a6Q8C6K9 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.07■□□□□ 0.16
Col6a6Q8C6K9 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms