Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Cps1Q8C196 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC24.25■■□□□ 1.47
Cps1Q8C196 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
Cps1Q8C196 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC24.25■■□□□ 1.47
Cps1Q8C196 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Cps1Q8C196 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Cps1Q8C196 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Cps1Q8C196 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Cps1Q8C196 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC24.25■■□□□ 1.47
Cps1Q8C196 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Cps1Q8C196 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Cps1Q8C196 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Cps1Q8C196 Gm11950-201ENSMUST00000121615 838 ntBASIC24.24■■□□□ 1.47
Cps1Q8C196 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Cps1Q8C196 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Cps1Q8C196 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Cps1Q8C196 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Cps1Q8C196 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC24.23■■□□□ 1.47
Cps1Q8C196 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
Cps1Q8C196 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Cps1Q8C196 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
Cps1Q8C196 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Cps1Q8C196 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Cps1Q8C196 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Cps1Q8C196 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Cps1Q8C196 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Cps1Q8C196 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
Cps1Q8C196 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
Cps1Q8C196 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Cps1Q8C196 Gm7153-201ENSMUST00000117092 455 ntBASIC24.22■■□□□ 1.47
Cps1Q8C196 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Cps1Q8C196 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Cps1Q8C196 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Cps1Q8C196 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Cps1Q8C196 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Cps1Q8C196 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC24.21■■□□□ 1.47
Cps1Q8C196 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC24.21■■□□□ 1.47
Cps1Q8C196 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Cps1Q8C196 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Cps1Q8C196 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Cps1Q8C196 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Cps1Q8C196 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC24.2■■□□□ 1.47
Cps1Q8C196 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Cps1Q8C196 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Cps1Q8C196 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Cps1Q8C196 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Cps1Q8C196 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Cps1Q8C196 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC24.2■■□□□ 1.46
Cps1Q8C196 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Cps1Q8C196 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Cps1Q8C196 Gm42922-201ENSMUST00000195887 2078 ntBASIC24.2■■□□□ 1.46
Cps1Q8C196 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Cps1Q8C196 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Cps1Q8C196 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Cps1Q8C196 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
Cps1Q8C196 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Cps1Q8C196 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Cps1Q8C196 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
Cps1Q8C196 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Cps1Q8C196 Gm11860-201ENSMUST00000122346 1010 ntBASIC24.19■■□□□ 1.46
Cps1Q8C196 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC24.19■■□□□ 1.46
Cps1Q8C196 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Cps1Q8C196 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Cps1Q8C196 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
Cps1Q8C196 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Cps1Q8C196 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Cps1Q8C196 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
Cps1Q8C196 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Cps1Q8C196 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC24.18■■□□□ 1.46
Cps1Q8C196 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Cps1Q8C196 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC24.18■■□□□ 1.46
Cps1Q8C196 Gm3272-201ENSMUST00000181181 1229 ntBASIC24.18■■□□□ 1.46
Cps1Q8C196 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Cps1Q8C196 Gm10566-201ENSMUST00000086739 996 ntBASIC24.18■■□□□ 1.46
Cps1Q8C196 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Cps1Q8C196 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
Cps1Q8C196 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Cps1Q8C196 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Cps1Q8C196 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Cps1Q8C196 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Cps1Q8C196 Gm7461-201ENSMUST00000058918 827 ntBASIC24.16■■□□□ 1.46
Cps1Q8C196 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Cps1Q8C196 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Cps1Q8C196 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Cps1Q8C196 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Cps1Q8C196 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
Cps1Q8C196 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Cps1Q8C196 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC24.15■■□□□ 1.46
Cps1Q8C196 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC24.15■■□□□ 1.46
Cps1Q8C196 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Cps1Q8C196 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Cps1Q8C196 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Cps1Q8C196 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC24.15■■□□□ 1.46
Cps1Q8C196 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
Cps1Q8C196 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Cps1Q8C196 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
Cps1Q8C196 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
Cps1Q8C196 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Cps1Q8C196 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Cps1Q8C196 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 100.3 ms