Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps9d1Q8C190 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps9d1Q8C190 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps9d1Q8C190 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps9d1Q8C190 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Vps9d1Q8C190 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps9d1Q8C190 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps9d1Q8C190 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Vps9d1Q8C190 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Vps9d1Q8C190 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Vps9d1Q8C190 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps9d1Q8C190 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps9d1Q8C190 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps9d1Q8C190 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps9d1Q8C190 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.74■□□□□ 0.27
Vps9d1Q8C190 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.74■□□□□ 0.27
Vps9d1Q8C190 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Vps9d1Q8C190 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Vps9d1Q8C190 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps9d1Q8C190 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps9d1Q8C190 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Vps9d1Q8C190 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Vps9d1Q8C190 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps9d1Q8C190 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.73■□□□□ 0.27
Vps9d1Q8C190 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Vps9d1Q8C190 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps9d1Q8C190 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps9d1Q8C190 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Vps9d1Q8C190 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps9d1Q8C190 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Vps9d1Q8C190 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Vps9d1Q8C190 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps9d1Q8C190 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps9d1Q8C190 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Vps9d1Q8C190 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps9d1Q8C190 Tgds-204ENSMUST00000228543 1594 ntBASIC16.72■□□□□ 0.27
Vps9d1Q8C190 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps9d1Q8C190 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps9d1Q8C190 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps9d1Q8C190 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps9d1Q8C190 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps9d1Q8C190 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps9d1Q8C190 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps9d1Q8C190 Gm13234-201ENSMUST00000120010 747 ntBASIC16.72■□□□□ 0.27
Vps9d1Q8C190 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps9d1Q8C190 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.72■□□□□ 0.27
Vps9d1Q8C190 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Vps9d1Q8C190 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps9d1Q8C190 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps9d1Q8C190 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps9d1Q8C190 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Vps9d1Q8C190 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps9d1Q8C190 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
Vps9d1Q8C190 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.71■□□□□ 0.27
Vps9d1Q8C190 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.71■□□□□ 0.27
Vps9d1Q8C190 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps9d1Q8C190 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps9d1Q8C190 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Vps9d1Q8C190 Gm37179-201ENSMUST00000194862 823 ntBASIC16.71■□□□□ 0.27
Vps9d1Q8C190 AV356131-201ENSMUST00000206201 750 ntBASIC16.71■□□□□ 0.27
Vps9d1Q8C190 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Vps9d1Q8C190 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps9d1Q8C190 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Vps9d1Q8C190 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps9d1Q8C190 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps9d1Q8C190 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps9d1Q8C190 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Vps9d1Q8C190 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Vps9d1Q8C190 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Vps9d1Q8C190 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Vps9d1Q8C190 Reep4-203ENSMUST00000226563 1444 ntBASIC16.7■□□□□ 0.26
Vps9d1Q8C190 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Vps9d1Q8C190 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps9d1Q8C190 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Vps9d1Q8C190 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Vps9d1Q8C190 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps9d1Q8C190 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps9d1Q8C190 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps9d1Q8C190 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps9d1Q8C190 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Vps9d1Q8C190 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps9d1Q8C190 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps9d1Q8C190 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps9d1Q8C190 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps9d1Q8C190 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps9d1Q8C190 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.7■□□□□ 0.26
Vps9d1Q8C190 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps9d1Q8C190 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps9d1Q8C190 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps9d1Q8C190 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Vps9d1Q8C190 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps9d1Q8C190 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Vps9d1Q8C190 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps9d1Q8C190 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps9d1Q8C190 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Vps9d1Q8C190 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps9d1Q8C190 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.69■□□□□ 0.26
Vps9d1Q8C190 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Vps9d1Q8C190 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Vps9d1Q8C190 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms