Protein–RNA interactions for Protein: Q8C0Q4

Nek11, Serine/threonine-protein kinase Nek11, mousemouse

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek11Q8C0Q4 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Nek11Q8C0Q4 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Nek11Q8C0Q4 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nek11Q8C0Q4 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nek11Q8C0Q4 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Nek11Q8C0Q4 Gm20760-201ENSMUST00000179197 648 ntBASIC21.21■□□□□ 0.99
Nek11Q8C0Q4 Gm29241-201ENSMUST00000189260 1096 ntBASIC21.21■□□□□ 0.99
Nek11Q8C0Q4 Gm18666-201ENSMUST00000190039 958 ntBASIC21.21■□□□□ 0.99
Nek11Q8C0Q4 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC21.21■□□□□ 0.99
Nek11Q8C0Q4 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Nek11Q8C0Q4 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC21.21■□□□□ 0.99
Nek11Q8C0Q4 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nek11Q8C0Q4 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nek11Q8C0Q4 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC21.21■□□□□ 0.99
Nek11Q8C0Q4 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nek11Q8C0Q4 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nek11Q8C0Q4 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Nek11Q8C0Q4 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC21.21■□□□□ 0.99
Nek11Q8C0Q4 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Nek11Q8C0Q4 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nek11Q8C0Q4 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Nek11Q8C0Q4 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nek11Q8C0Q4 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC21.2■□□□□ 0.98
Nek11Q8C0Q4 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
Nek11Q8C0Q4 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC21.2■□□□□ 0.98
Nek11Q8C0Q4 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nek11Q8C0Q4 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nek11Q8C0Q4 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Nek11Q8C0Q4 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nek11Q8C0Q4 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Nek11Q8C0Q4 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nek11Q8C0Q4 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nek11Q8C0Q4 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nek11Q8C0Q4 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC21.19■□□□□ 0.98
Nek11Q8C0Q4 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
Nek11Q8C0Q4 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nek11Q8C0Q4 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nek11Q8C0Q4 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Nek11Q8C0Q4 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nek11Q8C0Q4 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nek11Q8C0Q4 Gm5643-201ENSMUST00000117081 966 ntBASIC21.19■□□□□ 0.98
Nek11Q8C0Q4 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC21.19■□□□□ 0.98
Nek11Q8C0Q4 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Nek11Q8C0Q4 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nek11Q8C0Q4 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nek11Q8C0Q4 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Nek11Q8C0Q4 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nek11Q8C0Q4 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nek11Q8C0Q4 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nek11Q8C0Q4 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC21.19■□□□□ 0.98
Nek11Q8C0Q4 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nek11Q8C0Q4 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nek11Q8C0Q4 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Nek11Q8C0Q4 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC21.18■□□□□ 0.98
Nek11Q8C0Q4 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nek11Q8C0Q4 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC21.18■□□□□ 0.98
Nek11Q8C0Q4 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC21.18■□□□□ 0.98
Nek11Q8C0Q4 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nek11Q8C0Q4 Nrn1-203ENSMUST00000223611 1443 ntBASIC21.18■□□□□ 0.98
Nek11Q8C0Q4 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Nek11Q8C0Q4 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC21.18■□□□□ 0.98
Nek11Q8C0Q4 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Nek11Q8C0Q4 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nek11Q8C0Q4 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Nek11Q8C0Q4 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Nek11Q8C0Q4 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Nek11Q8C0Q4 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC21.17■□□□□ 0.98
Nek11Q8C0Q4 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nek11Q8C0Q4 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC21.17■□□□□ 0.98
Nek11Q8C0Q4 Gm29791-202ENSMUST00000207888 369 ntBASIC21.17■□□□□ 0.98
Nek11Q8C0Q4 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Nek11Q8C0Q4 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Nek11Q8C0Q4 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nek11Q8C0Q4 Gm37820-201ENSMUST00000194021 2147 ntBASIC21.17■□□□□ 0.98
Nek11Q8C0Q4 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Nek11Q8C0Q4 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nek11Q8C0Q4 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nek11Q8C0Q4 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nek11Q8C0Q4 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nek11Q8C0Q4 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nek11Q8C0Q4 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nek11Q8C0Q4 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC21.16■□□□□ 0.98
Nek11Q8C0Q4 H2-K2-201ENSMUST00000174250 1049 ntBASIC21.16■□□□□ 0.98
Nek11Q8C0Q4 Gm27011-201ENSMUST00000182352 972 ntBASIC21.16■□□□□ 0.98
Nek11Q8C0Q4 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC21.16■□□□□ 0.98
Nek11Q8C0Q4 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Nek11Q8C0Q4 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC21.16■□□□□ 0.98
Nek11Q8C0Q4 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nek11Q8C0Q4 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nek11Q8C0Q4 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nek11Q8C0Q4 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nek11Q8C0Q4 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Nek11Q8C0Q4 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nek11Q8C0Q4 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nek11Q8C0Q4 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nek11Q8C0Q4 Gm10418-201ENSMUST00000100943 576 ntBASIC21.15■□□□□ 0.98
Nek11Q8C0Q4 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC21.15■□□□□ 0.98
Nek11Q8C0Q4 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC21.15■□□□□ 0.98
Nek11Q8C0Q4 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Nek11Q8C0Q4 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms