Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdk5rap1Q8BTW8 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdk5rap1Q8BTW8 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.95■□□□□ 0.3
Cdk5rap1Q8BTW8 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.95■□□□□ 0.3
Cdk5rap1Q8BTW8 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdk5rap1Q8BTW8 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cdk5rap1Q8BTW8 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Cdk5rap1Q8BTW8 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdk5rap1Q8BTW8 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdk5rap1Q8BTW8 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdk5rap1Q8BTW8 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdk5rap1Q8BTW8 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cdk5rap1Q8BTW8 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.94■□□□□ 0.3
Cdk5rap1Q8BTW8 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cdk5rap1Q8BTW8 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdk5rap1Q8BTW8 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.94■□□□□ 0.3
Cdk5rap1Q8BTW8 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.94■□□□□ 0.3
Cdk5rap1Q8BTW8 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdk5rap1Q8BTW8 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cdk5rap1Q8BTW8 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.94■□□□□ 0.3
Cdk5rap1Q8BTW8 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdk5rap1Q8BTW8 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdk5rap1Q8BTW8 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Cdk5rap1Q8BTW8 Tgds-204ENSMUST00000228543 1594 ntBASIC16.94■□□□□ 0.3
Cdk5rap1Q8BTW8 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdk5rap1Q8BTW8 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cdk5rap1Q8BTW8 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Cdk5rap1Q8BTW8 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.93■□□□□ 0.3
Cdk5rap1Q8BTW8 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.93■□□□□ 0.3
Cdk5rap1Q8BTW8 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.93■□□□□ 0.3
Cdk5rap1Q8BTW8 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cdk5rap1Q8BTW8 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdk5rap1Q8BTW8 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdk5rap1Q8BTW8 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdk5rap1Q8BTW8 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdk5rap1Q8BTW8 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk5rap1Q8BTW8 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk5rap1Q8BTW8 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk5rap1Q8BTW8 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk5rap1Q8BTW8 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk5rap1Q8BTW8 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk5rap1Q8BTW8 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk5rap1Q8BTW8 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk5rap1Q8BTW8 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk5rap1Q8BTW8 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk5rap1Q8BTW8 Gm11643-201ENSMUST00000119578 864 ntBASIC16.92■□□□□ 0.3
Cdk5rap1Q8BTW8 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk5rap1Q8BTW8 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk5rap1Q8BTW8 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.92■□□□□ 0.3
Cdk5rap1Q8BTW8 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk5rap1Q8BTW8 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk5rap1Q8BTW8 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Cdk5rap1Q8BTW8 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk5rap1Q8BTW8 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk5rap1Q8BTW8 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk5rap1Q8BTW8 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk5rap1Q8BTW8 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.92■□□□□ 0.3
Cdk5rap1Q8BTW8 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk5rap1Q8BTW8 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdk5rap1Q8BTW8 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdk5rap1Q8BTW8 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Cdk5rap1Q8BTW8 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.91■□□□□ 0.3
Cdk5rap1Q8BTW8 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdk5rap1Q8BTW8 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdk5rap1Q8BTW8 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdk5rap1Q8BTW8 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdk5rap1Q8BTW8 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdk5rap1Q8BTW8 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdk5rap1Q8BTW8 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cdk5rap1Q8BTW8 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Cdk5rap1Q8BTW8 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cdk5rap1Q8BTW8 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdk5rap1Q8BTW8 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Cdk5rap1Q8BTW8 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdk5rap1Q8BTW8 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.91■□□□□ 0.3
Cdk5rap1Q8BTW8 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdk5rap1Q8BTW8 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdk5rap1Q8BTW8 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Cdk5rap1Q8BTW8 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdk5rap1Q8BTW8 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cdk5rap1Q8BTW8 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cdk5rap1Q8BTW8 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Cdk5rap1Q8BTW8 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdk5rap1Q8BTW8 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.9■□□□□ 0.3
Cdk5rap1Q8BTW8 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Cdk5rap1Q8BTW8 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Cdk5rap1Q8BTW8 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Cdk5rap1Q8BTW8 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdk5rap1Q8BTW8 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Cdk5rap1Q8BTW8 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cdk5rap1Q8BTW8 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.9■□□□□ 0.3
Cdk5rap1Q8BTW8 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdk5rap1Q8BTW8 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdk5rap1Q8BTW8 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdk5rap1Q8BTW8 Gm5417-201ENSMUST00000079706 384 ntBASIC16.9■□□□□ 0.3
Cdk5rap1Q8BTW8 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cdk5rap1Q8BTW8 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cdk5rap1Q8BTW8 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Cdk5rap1Q8BTW8 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Cdk5rap1Q8BTW8 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms