Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cpne3Q8BT60 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cpne3Q8BT60 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cpne3Q8BT60 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.27■□□□□ 0.35
Cpne3Q8BT60 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.27■□□□□ 0.35
Cpne3Q8BT60 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.27■□□□□ 0.35
Cpne3Q8BT60 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.26■□□□□ 0.35
Cpne3Q8BT60 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cpne3Q8BT60 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cpne3Q8BT60 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cpne3Q8BT60 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cpne3Q8BT60 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Cpne3Q8BT60 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.26■□□□□ 0.35
Cpne3Q8BT60 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cpne3Q8BT60 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cpne3Q8BT60 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cpne3Q8BT60 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cpne3Q8BT60 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.26■□□□□ 0.35
Cpne3Q8BT60 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
Cpne3Q8BT60 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.26■□□□□ 0.35
Cpne3Q8BT60 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cpne3Q8BT60 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cpne3Q8BT60 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Cpne3Q8BT60 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.26■□□□□ 0.35
Cpne3Q8BT60 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cpne3Q8BT60 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cpne3Q8BT60 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cpne3Q8BT60 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.25■□□□□ 0.35
Cpne3Q8BT60 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cpne3Q8BT60 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cpne3Q8BT60 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Cpne3Q8BT60 Tgds-204ENSMUST00000228543 1594 ntBASIC17.25■□□□□ 0.35
Cpne3Q8BT60 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cpne3Q8BT60 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Cpne3Q8BT60 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.25■□□□□ 0.35
Cpne3Q8BT60 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.25■□□□□ 0.35
Cpne3Q8BT60 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Cpne3Q8BT60 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cpne3Q8BT60 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cpne3Q8BT60 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cpne3Q8BT60 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cpne3Q8BT60 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cpne3Q8BT60 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cpne3Q8BT60 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Cpne3Q8BT60 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cpne3Q8BT60 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cpne3Q8BT60 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Cpne3Q8BT60 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cpne3Q8BT60 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cpne3Q8BT60 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cpne3Q8BT60 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cpne3Q8BT60 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cpne3Q8BT60 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cpne3Q8BT60 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
Cpne3Q8BT60 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.24■□□□□ 0.35
Cpne3Q8BT60 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.24■□□□□ 0.35
Cpne3Q8BT60 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.24■□□□□ 0.35
Cpne3Q8BT60 AV356131-201ENSMUST00000206201 750 ntBASIC17.24■□□□□ 0.35
Cpne3Q8BT60 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.24■□□□□ 0.35
Cpne3Q8BT60 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cpne3Q8BT60 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cpne3Q8BT60 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Cpne3Q8BT60 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.24■□□□□ 0.35
Cpne3Q8BT60 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cpne3Q8BT60 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cpne3Q8BT60 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cpne3Q8BT60 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cpne3Q8BT60 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cpne3Q8BT60 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Cpne3Q8BT60 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cpne3Q8BT60 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cpne3Q8BT60 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpne3Q8BT60 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpne3Q8BT60 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpne3Q8BT60 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpne3Q8BT60 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpne3Q8BT60 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cpne3Q8BT60 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cpne3Q8BT60 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cpne3Q8BT60 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Cpne3Q8BT60 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.23■□□□□ 0.35
Cpne3Q8BT60 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cpne3Q8BT60 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Cpne3Q8BT60 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpne3Q8BT60 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Cpne3Q8BT60 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpne3Q8BT60 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpne3Q8BT60 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpne3Q8BT60 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.23■□□□□ 0.35
Cpne3Q8BT60 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpne3Q8BT60 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cpne3Q8BT60 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cpne3Q8BT60 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cpne3Q8BT60 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cpne3Q8BT60 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cpne3Q8BT60 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cpne3Q8BT60 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cpne3Q8BT60 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cpne3Q8BT60 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cpne3Q8BT60 Gm22325-201ENSMUST00000158904 308 ntBASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms