Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 AC121577.1-201ENSMUST00000227302 707 ntBASIC20.48■□□□□ 0.87
Scfd1Q8BRF7 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scfd1Q8BRF7 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scfd1Q8BRF7 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scfd1Q8BRF7 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scfd1Q8BRF7 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.48■□□□□ 0.87
Scfd1Q8BRF7 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Scfd1Q8BRF7 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Scfd1Q8BRF7 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scfd1Q8BRF7 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scfd1Q8BRF7 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scfd1Q8BRF7 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.47■□□□□ 0.87
Scfd1Q8BRF7 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scfd1Q8BRF7 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Scfd1Q8BRF7 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scfd1Q8BRF7 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Scfd1Q8BRF7 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.47■□□□□ 0.87
Scfd1Q8BRF7 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC20.47■□□□□ 0.87
Scfd1Q8BRF7 Gm4974-201ENSMUST00000209974 875 ntBASIC20.47■□□□□ 0.87
Scfd1Q8BRF7 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scfd1Q8BRF7 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scfd1Q8BRF7 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scfd1Q8BRF7 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scfd1Q8BRF7 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scfd1Q8BRF7 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scfd1Q8BRF7 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scfd1Q8BRF7 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Scfd1Q8BRF7 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Scfd1Q8BRF7 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scfd1Q8BRF7 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scfd1Q8BRF7 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Scfd1Q8BRF7 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scfd1Q8BRF7 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scfd1Q8BRF7 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.46■□□□□ 0.87
Scfd1Q8BRF7 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scfd1Q8BRF7 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Scfd1Q8BRF7 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.46■□□□□ 0.87
Scfd1Q8BRF7 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scfd1Q8BRF7 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Scfd1Q8BRF7 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Scfd1Q8BRF7 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scfd1Q8BRF7 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scfd1Q8BRF7 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scfd1Q8BRF7 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scfd1Q8BRF7 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.46■□□□□ 0.87
Scfd1Q8BRF7 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scfd1Q8BRF7 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Scfd1Q8BRF7 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scfd1Q8BRF7 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scfd1Q8BRF7 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scfd1Q8BRF7 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.45■□□□□ 0.86
Scfd1Q8BRF7 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scfd1Q8BRF7 Gm10231-201ENSMUST00000181584 441 ntBASIC20.45■□□□□ 0.86
Scfd1Q8BRF7 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scfd1Q8BRF7 Gm10175-202ENSMUST00000208752 441 ntBASIC20.45■□□□□ 0.86
Scfd1Q8BRF7 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scfd1Q8BRF7 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scfd1Q8BRF7 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scfd1Q8BRF7 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scfd1Q8BRF7 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Scfd1Q8BRF7 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Scfd1Q8BRF7 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Scfd1Q8BRF7 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Scfd1Q8BRF7 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scfd1Q8BRF7 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Scfd1Q8BRF7 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Scfd1Q8BRF7 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Scfd1Q8BRF7 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC20.44■□□□□ 0.86
Scfd1Q8BRF7 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scfd1Q8BRF7 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.44■□□□□ 0.86
Scfd1Q8BRF7 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20.44■□□□□ 0.86
Scfd1Q8BRF7 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Scfd1Q8BRF7 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scfd1Q8BRF7 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Scfd1Q8BRF7 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Scfd1Q8BRF7 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
Scfd1Q8BRF7 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scfd1Q8BRF7 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scfd1Q8BRF7 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Scfd1Q8BRF7 Gm38027-201ENSMUST00000192315 235 ntBASIC20.43■□□□□ 0.86
Scfd1Q8BRF7 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20.43■□□□□ 0.86
Scfd1Q8BRF7 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scfd1Q8BRF7 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scfd1Q8BRF7 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Scfd1Q8BRF7 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Scfd1Q8BRF7 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scfd1Q8BRF7 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scfd1Q8BRF7 Gm13401-201ENSMUST00000117074 291 ntBASIC20.42■□□□□ 0.86
Scfd1Q8BRF7 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Scfd1Q8BRF7 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC20.42■□□□□ 0.86
Scfd1Q8BRF7 Gm29791-202ENSMUST00000207888 369 ntBASIC20.42■□□□□ 0.86
Scfd1Q8BRF7 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Scfd1Q8BRF7 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Scfd1Q8BRF7 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scfd1Q8BRF7 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.41■□□□□ 0.86
Scfd1Q8BRF7 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scfd1Q8BRF7 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scfd1Q8BRF7 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Scfd1Q8BRF7 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC20.41■□□□□ 0.86
Scfd1Q8BRF7 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms